Pairwise Alignments

Query, 323 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

Subject, 308 a.a., nucleoside ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a

 Score =  157 bits (397), Expect = 3e-43
 Identities = 108/316 (34%), Positives = 159/316 (50%), Gaps = 22/316 (6%)

Query: 11  LGSTVRLTIPLLFTALAGLFSERAGVFDIGLEGKMLAAAFASACVAYLTANPWAGLLAGI 70
           LGS     +P    AL  +  ER+GV  +G+EG ML  A A   +     +P   LLA +
Sbjct: 8   LGSAPDFAVPFALAALGLILIERSGVLALGVEGLMLVGALAGIGMQLSLGSPGLSLLASM 67

Query: 71  GVSILFSLIHGFAVITNRGNQIVSGVALNFIAAGLTVVLGQAWFGQGGRTPQLPGEGRFA 130
             + L SL+    V+  R NQ+++G+AL F   GLT +LG    G   R    P  G  A
Sbjct: 68  AAAGLVSLLFALMVLVLRINQVIAGLALVFFCQGLTGLLGTL-LGWTNR----PVSGLQA 122

Query: 131 PIILPGADAMREVPFIGPLYANVISGNNILTYLAFLAVPLSWWVLYRTRFGLRLRAVGEN 190
             + P    + E+P +G ++       N L YL  +      W+L RTR GLRLRAVGEN
Sbjct: 123 VELWP----LSELPVVGRVFVQ-----NPLVYLTVVIFIAVVWLLDRTRTGLRLRAVGEN 173

Query: 191 PGAVDTAGISVTWMRYRAVIVAGFLCGFSGAYLAVAQSAAFIANMSAGKGYIALAALIFA 250
           P A D AGISV   R  A++    L G +G ++AV  +  +IA+M+ G+G+IA++ +IFA
Sbjct: 174 PQAADAAGISVLGYRLAAIVAGSALMGLAGGFIAVLSTKMWIADMTGGRGWIAVSLVIFA 233

Query: 251 KWKPVPVMFACLLFGFLDAFANFMQGKSVPGIGEVPVQIFQAMPYILTCILL----AGFI 306
           +W P   +   LLFG ++A    +    V     +P       PY +T +++    +G  
Sbjct: 234 RWSPWRALAGALLFGGIEALIPQLAATGV----RLPQYFVLMTPYAVTLLVMVWVASGKR 289

Query: 307 GVAKPPKAGGVAYAKE 322
             +  P A G  Y +E
Sbjct: 290 QSSSQPGALGEPYIRE 305