Pairwise Alignments

Query, 323 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

Subject, 310 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  204 bits (520), Expect = 2e-57
 Identities = 119/315 (37%), Positives = 173/315 (54%), Gaps = 15/315 (4%)

Query: 7   LVSILGSTVRLTIPLLFTALAGLFSERAGVFDIGLEGKMLAAAFASACVAYLTANPWAGL 66
           L + + ++ RL  PL+F ++  +FSERAGV +IGLEG MLA AFA    A+ + +   G+
Sbjct: 10  LAATIAASWRLAAPLMFASIGEVFSERAGVLNIGLEGVMLAGAFAGFAAAFTSGSILLGV 69

Query: 67  LAGIGVSILFSLIHGFAVITNRGNQIVSGVALNFIAAGLTVVLGQAWFGQGGRTPQLPGE 126
            A +   +L  L+  F  IT + +QIV G A+N +  GLT  L +A+F   G+  ++   
Sbjct: 70  AAAVAAGVLVGLLFAFFTITIKADQIVVGAAINLLGLGLTAFLFRAYFSSAGKGIEIA-- 127

Query: 127 GRFAPIILPGADAMREVPFIGPLYANVISGNNILTYLAFLAVPLSWWVLYRTRFGLRLRA 186
               P+ LP    + ++PF G  +       N   Y       L+ +VLYRT FGL LRA
Sbjct: 128 ---KPVDLPW---LSDLPFFGEAFFR----QNAFVYSTLPVAALAVFVLYRTSFGLTLRA 177

Query: 187 VGENPGAVDTAGISVTWMRYRAVIVAGFLCGFSGAYLAVAQSAAFIANMSAGKGYIALAA 246
           VGE+P AVD +G SV   RY AV++   L    GA+L +A S  F+  +S+G+G+IALA 
Sbjct: 178 VGEHPKAVDVSGRSVALYRYGAVLICSALAALGGAFLTLAHSNQFVEGISSGRGFIALAV 237

Query: 247 LIFAKWKPVPVMFACLLFGFLDAFANFMQGKSVPGIGEVPVQIFQAMPYILTCILLAGFI 306
           ++FA+W P+      LLFG   A    +Q + V  +   P Q+FQA+PY++T   L    
Sbjct: 238 VVFARWSPIGAFIVSLLFGVFYALQLQLQAQPVLFL---PYQLFQALPYVMTIAALILVR 294

Query: 307 GVAKPPKAGGVAYAK 321
                P   GVAY K
Sbjct: 295 NRVDTPSMLGVAYKK 309