Pairwise Alignments

Query, 367 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

Subject, 340 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  138 bits (347), Expect = 2e-37
 Identities = 97/349 (27%), Positives = 160/349 (45%), Gaps = 22/349 (6%)

Query: 18  PLLNVVTAFLISGLVVWSIGENPLAALRLLIEGALGRGDAIGFTLFYTTSFIFTGLSVAV 77
           P++     FL   ++  ++G +PLA L       +   + +   L   +  I     +AV
Sbjct: 6   PVIATALTFLAGSVLFAALGYDPLATLHAFFVAPINSTNGLSEWLLKASPLILIACGLAV 65

Query: 78  AFHAGLFNIGSEGQAYVGGLGAALVALAL-DRYVPWYVTMPFAVIGAAVFGAAWAFIPAW 136
            F A ++NIG+EGQ  +G + A  V L   D   P  + +P   +  A  G AWA IPA+
Sbjct: 66  GFRANIWNIGAEGQLIIGAIAACGVGLFYPDPESP--LLIPLMFLAGAGAGMAWAAIPAF 123

Query: 137 LQAKRGSHVVITTIMFNFIAAALMVYLLVNVLIVP-GKMAPETRTFLPGGQLPKLDWLMA 195
           L+A+  ++ ++ T+M  +IA  L+ +L+      P G   P+T            D    
Sbjct: 124 LRARMNTNEILVTLMLTYIATLLLSFLVHGPWRDPAGFNYPQTALLPAAAMFEPFD---- 179

Query: 196 WFGLKLGPAPFNVSFLIALVMCFLVWVLIWRTKLGYEMRTLGVSPSAAIYAGIPYSRTVI 255
            +  +L P+ F     I  V   ++W+   R+ LGY+M   G +P AA YAG   S  V 
Sbjct: 180 -YSYRLNPSIF-----ITAVAVVMMWLFTDRSFLGYKMSVSGAAPLAARYAGFRESSAVW 233

Query: 256 IAMLISGGLAGMMALNPVMGASARLQVEFVGGAGFVGIAVSLMGRSHPLGIIFSALLFGI 315
             +L  G  AG+  +  V G   +L  +   G GF  I V+ +GR +  GI+   LL  +
Sbjct: 234 TGLLAGGAAAGIAGMAEVAGPLGQLSPQISPGYGFAAIIVAFIGRLNAFGIVLGGLLMSL 293

Query: 316 LYQGGADLSFEMPNITREMIVVIQGLVILFAGALEYMYRPAIVHIYQRL 364
           L+ GG  +   +  +   +  + QG+++ F  A ++        IY RL
Sbjct: 294 LFLGGETVQMTL-GLPAALTRIFQGILLFFLLAADFF-------IYYRL 334