Pairwise Alignments

Query, 633 a.a., DNAK Protein from Agrobacterium fabrum C58

Subject, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

 Score =  817 bits (2111), Expect = 0.0
 Identities = 425/639 (66%), Positives = 519/639 (81%), Gaps = 12/639 (1%)

Query: 1   MAKVIGIDLGTTNSCVAVMDGKDTKVIENAEGARTTPSMVAFSDDGERLVGQPAKRQAVT 60
           M K+IGIDLGTTNSCVAV+DG   +VIENAEG RTTPS++A++D GE LVGQPAKRQAVT
Sbjct: 1   MGKIIGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTD-GETLVGQPAKRQAVT 59

Query: 61  NPTNTLFAVKRLIGRRYEDPTVEKDKALVPFEIVKGDNGDAWVKAQDKNYSPSQISAMIL 120
           NP NTLFA+KRLIGRR+ED  V++D  ++P++IVK DNGDAWV+A+ +  +  Q+SA +L
Sbjct: 60  NPQNTLFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVEAKGQKMAAPQVSAEVL 119

Query: 121 QKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALAYG 180
           +KMK+TAE +LGE V  AVITVPAYFNDAQRQATKDAGRIAGL+V RIINEPTAAALAYG
Sbjct: 120 KKMKKTAEDFLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG 179

Query: 181 LDKKEG-KTIAVYDLGGGTFDISVLEI----GDGVFEVKSTNGDTFLGGEDFDMRLVEYL 235
           LDK+ G +TIAVYDLGGGTFDIS++EI    G+  FEV STNGDT LGGEDFD R++ YL
Sbjct: 180 LDKQGGDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYL 239

Query: 236 AGEFKKDQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFITADASGPKHLTLKL 295
             EFKKDQGIDL+ND LA+QRLKEAAEKAKIELSS+QQT++NLP+ITADA+GPKH+ +K+
Sbjct: 240 VDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV 299

Query: 296 TRAKFESLVDDLVQRTVAPCKAALKDAGVTAAEIDEVVLVGGMSRMPKVQEVVKQLFGKE 355
           TRAK E+LV+DLVQR++ P K AL DA ++  +I +V+LVGG +RMP VQ+ V + FGKE
Sbjct: 300 TRAKLEALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKE 359

Query: 356 PHKGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPT 415
           P K VNPDE VA+GAA+Q GVL G+VKDVLLLDVTPLSLGIET+GGV T+LI++NTTIPT
Sbjct: 360 PRKDVNPDEAVAVGAAVQGGVLAGEVKDVLLLDVTPLSLGIETMGGVMTKLIEKNTTIPT 419

Query: 416 KKSQTFSTAEDNQSAVTIRVSQGEREMAQDNKLLGQFDLVGLPPSPRGVPQIEVTFDIDA 475
           K +Q FSTAEDNQSAVTI V QGER+ A  NK LGQF+L G+ P+PRG+PQIEV FD+DA
Sbjct: 420 KANQVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPRGMPQIEVIFDLDA 479

Query: 476 NGIVQVSAKDKGTGKEQQIRIQASGGLSDADIEKMVKDAEANAEADKKRRAGVEAKNQAE 535
           +GI+ VSAKDK TGKEQ+I IQASGGLSDA+IEKMV++AEAN EADKK      A+NQA+
Sbjct: 480 DGILHVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELATARNQAD 539

Query: 536 SLIHSTEKSVKEYGDKVSETDRKAIEDAIASLKTAVEAAEPDADDIQAKTQTLMEVSMKL 595
            +IH+T K + E G+ +   ++  IE AI  L+TA +    D  +I AK Q LM  + KL
Sbjct: 540 QMIHATRKQITEAGEALPADEKAKIETAINELETAKKG--EDKAEIDAKVQALMAAAQKL 597

Query: 596 ---GQAIYEAQQAEAGDASAEGKDDVVDADYEEIKDDKK 631
               Q   +AQ A AG +SA+ +DDVVDA++EE+ DDKK
Sbjct: 598 MEIAQQQAQAQGANAGQSSAK-EDDVVDAEFEEVNDDKK 635