Pairwise Alignments

Query, 622 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  330 bits (845), Expect = 1e-94
 Identities = 196/552 (35%), Positives = 315/552 (57%), Gaps = 23/552 (4%)

Query: 68  LSRYEPLPALIADHDDIEELVAHPKDEALRQRANVYLKSINTLLESSDIYIITLDGETIA 127
           L +Y  +P LI+   ++ + +   ++ A     N YL+ +N +++++D Y+I   G TIA
Sbjct: 53  LDKYAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIA 112

Query: 128 ASNYDGPTSFVGENFSYRPYFQDAAKGLKSRFFALGTTSHKRGYYFSAPILFNEEIKGVI 187
           +SN++   SF+G NF++RPYF  +  G KS++FALG+TS +RGYY++ P+++  EI GVI
Sbjct: 113 SSNWNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIYAAEILGVI 172

Query: 188 VFKVDIEGIEASFGDGENRILVSDPEGIIFMTGTPQWLYSGLMPLTPERLARTEASRRYA 247
           V K+D+  IE  +    +  + +D   ++FM+  P WL+  +  L+P +L     S++Y 
Sbjct: 173 VVKMDLSAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLNDIRQSQQYL 232

Query: 248 NATLTELPLKNGNFGSHQLMTIAQNDGDR-----EYMVLSQPMQDAGWTVSVLMDTGSLR 302
           ++ +  L    G  G  Q         ++     +Y+V S+P+ +   T+ VL  +  + 
Sbjct: 233 DSPIPSL----GWQGDLQAEQSEWRKPEKHWLQDDYIVSSRPLPELALTIRVL--SPKIE 286

Query: 303 TQVKTAMIAIILCLCLAAALIAAMLQRRRRLRERLTH--QAEAQAELERRVEERTADLAR 360
                  + IILC+  A   +   L   R+LR+R     Q E + +LE  V ERTA    
Sbjct: 287 LFWSAFGLVIILCMLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQKLEFEVMERTA---- 342

Query: 361 VNQEIKHEIAERRQTEKQLRKMQNDLVQAGKLAALGQMSAALSHEFNQPLAAAKNYAENA 420
              ++  EIAER +TE  LR+ Q++L+QA KLA LGQMSA++SHE N PLAA +++A+N 
Sbjct: 343 ---KLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNG 399

Query: 421 SLLVERGRLEEVTENLRRISGLIDRMASISKHLRNFARK-PNEKTAAVGLETVIRDTLEI 479
              +   + E   ENL RIS L +RMA IS+ L++FARK  + +   V L  +I    E+
Sbjct: 400 RRFLATNKPERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKEL 459

Query: 480 VGPRLKAADAMLDIDLGPVPLAVKAGPVRLQQVLVNIISNAADAVEGREDRRISLQTVQH 539
           +  + KA   +L++     P+ V+  P++L+QVL+N+++NA  A+EG+ +R + ++    
Sbjct: 460 MTGQFKAQMTLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIRLQTS 519

Query: 540 GQAVSIFIRDHGPGVPAAISERIFDPFFTTKGVGRGLGLGLSISYNIIKDFGGQLRVKNH 599
            Q +++F+ D+GPGV       +F+PF TTK    GLGLGLSIS  I+    G L V   
Sbjct: 520 EQQIALFVDDNGPGVGIETLPHLFEPFHTTK--KNGLGLGLSISQQILHSMQGTLSVATS 577

Query: 600 EESGAEFEIELP 611
              GA F I LP
Sbjct: 578 PLGGARFTITLP 589