Pairwise Alignments

Query, 622 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 589 a.a., C4-dicarboxylate transport sensor protein DctB from Phaeobacter inhibens DSM 17395

 Score =  233 bits (595), Expect = 1e-65
 Identities = 174/574 (30%), Positives = 284/574 (49%), Gaps = 40/574 (6%)

Query: 50  SDQGHTTLRLAVSALGGLLS---RYEPLPALIADHDDIEELVAHPKDEALRQRANVYLKS 106
           S +    LRLA+ + G L+S   R+  +P L+A    +   +         QR   +++ 
Sbjct: 52  STRNRAELRLALYS-GNLVSELGRHAIVPQLLARDQALISALQSNDFSLSTQRLISFVEE 110

Query: 107 INTLLESSDIYIITLDGETIAASNYDGPTSFVGENFSYRPYFQDAAKGLKSRFFALGTTS 166
           I     ++ I ++  DG T+AA++ +     +GE      YF DA +   + F A+ T  
Sbjct: 111 IG----AASIMLMAQDGRTVAATDRNR----LGETHRNAAYFVDALRSKTTVFSAIRTEV 162

Query: 167 HKRGYYFSAPILFNEEIKGVIVFKVDIEGIEASFGDGENRILVSDPEGIIFMTGTPQWLY 226
               + +S  I+    I GVIV +VD++  E ++    + ++VSD  G I +    +W  
Sbjct: 163 GSYRFTYSRRIVDTSGILGVIVVEVDLQKFERAWAGISDAVMVSDSTGTILLATESRW-- 220

Query: 227 SGLMPLTPERLARTEASRRYANATLTELPLKNGNFGSHQLMTIAQNDGDREYMVLSQPMQ 286
            GL      +L   E + + A    T+            L   A   G+   M L   + 
Sbjct: 221 RGLSEEDALQLQTPEGAIQRAIRATTDWTA---------LPADAYLQGEA-VMRLESRIP 270

Query: 287 DAGWTVSVLMDTGSLRTQVKTAMIAIILCLCLAAALIAAMLQRRRRLRERLTHQAEAQAE 346
             GW ++      S+R +V T +   I+   +  AL    L RR  LR  L         
Sbjct: 271 FQGWRLTSFTTYASIRERVNTVLALEIMGFAILLALAFYALSRRTALRMAL--------- 321

Query: 347 LERRVEERTADLARVNQEIKHEIAERRQTEKQLRKMQNDLVQAGKLAALGQMSAALSHEF 406
                +  +A+L  +N  ++ EIAER + ++ L   +  L Q+ KLAALG+MSAA+SHE 
Sbjct: 322 ----FQRESAELRVLNARLQREIAERERMQETLAVAEQSLAQSSKLAALGEMSAAVSHEL 377

Query: 407 NQPLAAAKNYAENASLLVERGRLEEVTENLRRISGLIDRMASISKHLRNFARKPNEKTAA 466
           NQPLAA K Y   A LL+ R R EE   +  RI  LI+RM +I++ L+++ARK  +  + 
Sbjct: 378 NQPLAAMKTYLAGARLLLNRNRPEEALASFGRIDDLIERMGAITRQLKSYARKGGDAFSP 437

Query: 467 VGLETVIRDTLEIVGPRLKAADAMLDIDLGPVPLAVKAGPVRLQQVLVNIISNAADAVEG 526
           V +   +  +L ++ P+L+     +   L   P+ V    +R++QV+VN++ NA DA + 
Sbjct: 438 VNMGDALASSLSMMEPQLRQRHVKIARILPEQPVYVMGDRMRIEQVMVNLLRNALDATKS 497

Query: 527 REDRRISLQTVQHGQAVSIFIRDHGPGVPAAISERIFDPFFTTKGVGRGLGLGLSISYNI 586
             D  + +  +  G+  ++ +RD+G G+    S  +F+PF+TTK  G G+GLGL+IS  I
Sbjct: 498 VADPEVEI-LLAAGETATLSVRDNGMGIKDFGS--LFEPFYTTKQPGDGVGLGLAISSGI 554

Query: 587 IKDFGGQLRVKNHEESGAEFEIELPAAAWRTEAA 620
           + D GG+L  +N +  GA FE++LP      EAA
Sbjct: 555 VNDLGGRLTARNGQNGGAVFEMQLPILVDGIEAA 588