Pairwise Alignments

Query, 998 a.a., DNA polymerase I from Agrobacterium fabrum C58

Subject, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

 Score =  124 bits (311), Expect = 8e-33
 Identities = 78/262 (29%), Positives = 137/262 (52%), Gaps = 16/262 (6%)

Query: 6   HLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVTPTHFA 65
           HL ++D    I R   A P  N  +              L +++ +A+       P+H  
Sbjct: 28  HLVIIDALNLIRRVHSAQPDPNDIT-----RTAETTTRTLQRIINEAQ-------PSHMI 75

Query: 66  VIFDY--SSKTFRNELYDLYKANRSAPPEDLVPQFGLIREATRAFNLPCIETEGFEADDI 123
            +FD+  S + +R EL   YKANR   P+ L      I++A     +  + +EG EADD+
Sbjct: 76  AVFDHHLSDRGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDL 135

Query: 124 IATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGVPDVIEKWGVGPEKMI 183
           +AT A +  A    VTIIS+DK   QL++  + + D  + + +  P + +++GV P ++ 
Sbjct: 136 VATLACKVAAHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLT 195

Query: 184 DLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANAELA 243
           D   +TG S+  +PG+ GIGPK A ++L ++  ++   A A      K R+ +  + E+A
Sbjct: 196 DYWGLTGVSSSQIPGVAGIGPKAAKEILNQFSSIEE--AYASPELPAKYRKKLDPHIEMA 253

Query: 244 RLSRQLVALRTDVPLEQSLEEL 265
           R+ +Q+ AL+TD+ L  +L+++
Sbjct: 254 RICKQVSALKTDIELGFNLQDI 275