Pairwise Alignments

Query, 764 a.a., penicillin-binding protein from Agrobacterium fabrum C58

Subject, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

 Score =  281 bits (718), Expect = 1e-79
 Identities = 185/522 (35%), Positives = 281/522 (53%), Gaps = 28/522 (5%)

Query: 148 AVMAIEDRRFYSHFGVDPLGLGRAIVTNVLTGRAVQGGSTLTQQLAKNLFLSPDRTLERK 207
           A++  EDR FY H GV PL +GRA+V N+  GR VQGGSTLTQQLAKN+FLS DRTL RK
Sbjct: 195 ALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTLWRK 254

Query: 208 VQEVLLSFWLEHEFTKDQILAMYLNRVYFGSNA----YGVEAASRRYFNKSARDVNLGEA 263
           ++E  ++  +++ ++KD+IL  YLN VY G +     +G   ASR YF +  +++ + + 
Sbjct: 255 LREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQELRIDQL 314

Query: 264 AMLAGLLKAPSRLSPARDPQAAEERAQVVLQSMRDVGFITDDEIKTAMSQP--PTKAKRF 321
           A+L G++K PS  +P R  + A ER  +VL+ M +   +T  E + A+++P    K  + 
Sbjct: 315 ALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKTAQI 374

Query: 322 WSGAEHYAADMVLEEVRGLVGEVKQD--IVVDTTIDPNLERDAEKALTHVLQGDGKKQGA 379
            S    Y   + +E    L  + K D  + V T++DP  +   E+A+   +    K  G 
Sbjct: 375 ASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQLAKTAGK 434

Query: 380 S-QAALVSID-GTGAIRAVVGGADYAQSQFNRAVKAKRQPGSAFKPFVYVAAL--ESGLT 435
             +AA +++D  +G IRA+VGG       FNR + A RQ GS  KP VY+ AL       
Sbjct: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494

Query: 436 PYTIRNDGPVRI-----GNWTPENYEKKYRGEVTLATALANSLNTIAAQLVMEVGPERVT 490
             T   D P+ +       WTP NY+++YRGEV L  ALA SLN     L M++G ++V+
Sbjct: 495 LATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQVS 554

Query: 491 QVAHRMGI-ESELQNNASIALGTSEVSLMELTASYAPFMNGGYKATPHIVKRITDADGKV 549
               ++G+   E++   S+ LG+  ++  ++   Y    N G KA    ++ + D +G V
Sbjct: 555 ATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGNV 614

Query: 550 LYENKYDNPPRV---LSEEIAATMNGMLSRVITEGTGKAARLQGWQA--AGKSGTTQSFR 604
           LYE+     PRV   + ++ A      + + + EGTG+    Q   A  AGK+GTT   R
Sbjct: 615 LYESL----PRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTGTTNDNR 670

Query: 605 DALFVGYTSNLTTGVWFGNDDGTSMKKVTGGGLPARAWKDFM 646
           D+ FVG      T +W G DD     K+TG     R +  ++
Sbjct: 671 DSWFVGVDGREVTTIWLGRDD-NQPTKLTGASGALRVYAQYL 711