Pairwise Alignments

Query, 251 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Agrobacterium fabrum C58

Subject, 254 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) from Pseudomonas fluorescens FW300-N1B4

 Score =  159 bits (401), Expect = 7e-44
 Identities = 107/251 (42%), Positives = 142/251 (56%), Gaps = 20/251 (7%)

Query: 11  VLIPARMASTRLPGKPLADIGGRPMIVQVALRAREAGAERIVVAVDDEQVFAAVQNAGFD 70
           V+IP+R ASTRLPGKPL  I G+PMI  V  +A ++ A+++VVA DD ++  A ++ G D
Sbjct: 7   VVIPSRYASTRLPGKPLLLIAGKPMIQHVWEQASKSSAQQVVVATDDARIVEACKSFGAD 66

Query: 71  VMMTRGDHQSGSDRIFEALQKADPYGKAEYVINVQGDLPTIEAETI-RASLRPMENAAVD 129
           V++TR DH SG+DR+ E   K      A  V+NVQGD P I    I + +     +    
Sbjct: 67  VVLTREDHNSGTDRLAEVAAKLGLAPDA-IVVNVQGDEPLIPPSVIDQVAANLAAHTEAR 125

Query: 130 IATLTVEITDEEEKTNPNVVKVVGSPLSETRLRALYFTRTTAPYGDG------------- 176
           +ATL+  I D E   NPNVVKVV    S+    AL F+R T P+                
Sbjct: 126 MATLSEPIEDVETLFNPNVVKVV----SDLNGLALTFSRATLPWARDAFAKSREQLPEGV 181

Query: 177 PLYHHIGLYTYRRAALETFVRLPPSPLELRERLEQLRALEAGMRID-AEIVRSVPLGVDT 235
           P   HIG+Y YR   L+ FV   P  LE  E LEQLRAL  G+RI  A+ + + P GVDT
Sbjct: 182 PYRRHIGIYAYRAGFLQDFVIWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDT 241

Query: 236 PHDLEKARKIL 246
             DLE+ R++L
Sbjct: 242 IEDLERVRRLL 252