Pairwise Alignments

Query, 624 a.a., DNA polymerase III, tau subunit from Agrobacterium fabrum C58

Subject, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

 Score =  246 bits (627), Expect = 3e-69
 Identities = 165/464 (35%), Positives = 247/464 (53%), Gaps = 16/464 (3%)

Query: 18  YRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLTGVRGVGKTTTARILARA 77
           Y  LARK+RP  FS++ VGQ  ++  L NA    R+  AY+ +G RGVGKTT  R+ A+ 
Sbjct: 3   YLALARKWRPTRFSEV-VGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAKG 61

Query: 78  LNYKTDTIDKPTIDLRIPGEHCQAIMEGRHVDVIEMDAASHTGIDDIREIIEQVRYRPVS 137
           LN +T     P          CQ I +GR VD++E+DAAS T ++D RE+++ V+Y+P  
Sbjct: 62  LNCETGITATPCGQCAT----CQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPAR 117

Query: 138 ARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLRR 197
            R+KVY+IDEVHMLS  +FN LLKTLEEPPE+VKF+ ATT+ +K+P+T+LSRC +F L+ 
Sbjct: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKP 177

Query: 198 ISAADLVGLFTAIAGKEGFEAEPQALSMIARAAEGSARDGLSLLDQAIAHGGGRVEAEAV 257
           IS  ++      +   E   ++ +AL+++A AA+GS RD LSL DQAIA G G V+++ V
Sbjct: 178 ISVENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIV 237

Query: 258 RGMLGLADRARIVDLFQHVVKGDVAAALSEFNGQYEAGANPVVVLNDLADFTHLVTRMKY 317
             MLG  D    + L Q +      A +       + G     +L  L+   H +   + 
Sbjct: 238 AHMLGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQA 297

Query: 318 VPDAAEDPSLSEIERTRGAEFAETIAVTALSRIWQMLLKGIPETENASRPAGAAEMVLIR 377
           +P A  D SL E  R      A+T+A   +   +Q+ LKG  +   +       EM+++R
Sbjct: 298 LP-ATLDKSLPEASRIE--SLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLR 354

Query: 378 LSHAANLPAPEDAARRLLELSSADGSYTNGGPSGGGNGGGARAYSSAQTVAAARPAEFAA 437
           +   A  P+    A  ++  ++A  + T   P+       A A    Q VA +  ++ A+
Sbjct: 355 M--MAFRPSHVSLASVIVPPNTAVTAPTIAAPT----SQMAAAAPQPQPVAQSNVSQSAS 408

Query: 438 PRQAGPQPSTMLRAVP--DSRPQEMQVAAPKTEERPEPKVPVNS 479
                P    M+ A P  +S     Q  A  +   PE  V  N+
Sbjct: 409 QAMPHPVAPPMMAAQPVVESAVPVTQREASHSINAPEASVVTNT 452