Pairwise Alignments

Query, 624 a.a., DNA polymerase III, tau subunit from Agrobacterium fabrum C58

Subject, 315 a.a., replication factor C small subunit from Methanococcus maripaludis S2

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 27/225 (12%)

Query: 24  KYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLTGVRGVGKTTTARILARALNYKTD 83
           KYRP+  S++ VG   +++ LTN  E   +    + +G  GVGKTT A  LA+ L   T 
Sbjct: 8   KYRPETLSEV-VGHHEIIKRLTNYVEKKSMPHL-LFSGSPGVGKTTAALALAKDLYGDT- 64

Query: 84  TIDKPTIDLRIPGEHCQAIMEGRHVDVIEMDAASHTGIDDIREIIEQ-VRYRPVS-ARYK 141
                                    + +E++++   GID IR  ++   R +P+  A +K
Sbjct: 65  ----------------------WRENFLELNSSDERGIDVIRTKVKDFARTKPIGDAPFK 102

Query: 142 VYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLRRISAA 201
           V  +DE   L++ A N L +T+E+  +  +FI +     K+   + SRC  F    +   
Sbjct: 103 VIFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTE 162

Query: 202 DLVGLFTAIAGKEGFEAEPQALSMIARAAEGSARDGLSLLDQAIA 246
           DLV     I+ KE    E   +  I   +EG  R  +++L  A A
Sbjct: 163 DLVENLKDISEKENLNLEKGGIDAIIYVSEGDMRKAINVLQTAAA 207