Pairwise Alignments

Query, 260 a.a., ABC transporter, nucleotide binding/ATPase protein (sugar) from Agrobacterium fabrum C58

Subject, 264 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  192 bits (487), Expect = 8e-54
 Identities = 104/250 (41%), Positives = 157/250 (62%), Gaps = 4/250 (1%)

Query: 3   KEPILTARNLVKRYGRVTALDNADFDLYPGEILAVIGDNGAGKSSLIKAISGAVTPDEGE 62
           + PI+  +N+ K +G V AL     D++PGE   ++GDNGAGKS+ IK +SG   P +GE
Sbjct: 7   RAPIIQMKNIEKHFGAVIALAGVSIDIFPGECHCLLGDNGAGKSTFIKTMSGVHKPTKGE 66

Query: 63  IRLEGQPVQFRSPIEARKAGIETVYQNLALSPALSIADNMFLGREIRKPGIQGSLFRALD 122
           I  EG+P+ F  P +A +AGI TV+Q+LA+ P +S++ N F+G E  K  I G  F  LD
Sbjct: 67  IIFEGRPMHFEDPRDAMEAGIATVHQHLAMIPLMSVSRNFFMGNEPVKK-IAGINF--LD 123

Query: 123 RPAMEKFAREKLSELGLMTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVILDEPTAAL 182
           R   ++   E++ ++G+  ++  +QAV TLSGG+RQ VA++RA  FG+KV+ILDEPT+AL
Sbjct: 124 REFADRVTMEEMRKMGI-NLRGPDQAVGTLSGGERQTVAISRAVYFGAKVLILDEPTSAL 182

Query: 183 GVKESRRVLELILDVRSRGLPIVLISHNMPHVFEVADRIHIHRLGKRLCVINPKDYSMSD 242
           GV+++  VL  I  VR +G+ +V I+HN+ H   V DR  +   G+ L      + +  +
Sbjct: 183 GVRQTSNVLATIDKVRKQGVAVVFITHNVRHAMAVGDRFTVLNRGQTLGTAERGEITPEE 242

Query: 243 AVAFMTGAKE 252
               M G +E
Sbjct: 243 LQDMMAGGQE 252