Pairwise Alignments

Query, 360 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 324 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  160 bits (404), Expect = 6e-44
 Identities = 108/312 (34%), Positives = 166/312 (53%), Gaps = 16/312 (5%)

Query: 53  IVLVLSLAIFGMTLG---GKFFSAFSLTLILQQVAIVGIVGAAQSLVILTAGIDLSVGAI 109
           + LV  L +  + LG     F++  +++ +L+Q A+  I+   Q+ VI+TAGIDLSVGA+
Sbjct: 23  LTLVGLLVVLWLLLGLATNAFWTPNNISNLLRQGAMTAILAVGQTFVIITAGIDLSVGAV 82

Query: 110 MVLSSVVMGQFTFRYGLPAELSIICGLAVGAFCGFINGVLVSRMRLPPFIVTLGMWQIVL 169
           +  +SV++  +    G+P  L+II  LA+G   G  +   + RM LPPFI+TL     + 
Sbjct: 83  VGFTSVIVA-WLLAAGVPLWLAIIATLAIGVLIGAFHAFGIVRMGLPPFIITLATLTSLR 141

Query: 170 ATNFLYSANETIR-AQDIVQQAPILQFFGNNIRIGNAVFTYGVLAMVLLVALLWYV-LNR 227
               L +   TI    D         F G             +  MV++VA+  YV L+ 
Sbjct: 142 GIGLLITNGSTISITNDAFTTFSRADFLG----------IPSLFWMVIVVAIPAYVFLHL 191

Query: 228 TAWGRHLYAVGDDPDAAELAGVNVKRMLTTVYTLSGLICAFAGWALIGRIGSVSPTAGQF 287
           + +GR+L+AVG + +AA L+GVNV R +   Y LS    AF G  L  RIG  + T  + 
Sbjct: 192 SRFGRYLFAVGSNSEAARLSGVNVNRTIYLAYILSSTCAAFVGLLLASRIGIGNATQAEG 251

Query: 288 ANIESITAVVIGGISLFGGRGSIMGMIFGALIVGVFSLGLRLIGTDPQWTYLLIGVLIIL 347
             +++I + VIGG SLFG  GS+ G + GA I+   + G  L+  +  W  ++ G+LII+
Sbjct: 252 WELQAIASSVIGGTSLFGAVGSVHGPLLGAFILATINNGANLLNVNSFWQRIITGLLIIV 311

Query: 348 AVAIDQWIRKVA 359
            V  DQ  R+ A
Sbjct: 312 IVYFDQLRRRGA 323