Pairwise Alignments

Query, 360 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 321 a.a., ribose ABC transporter permease from Klebsiella michiganensis M5al

 Score =  178 bits (451), Expect = 2e-49
 Identities = 105/301 (34%), Positives = 175/301 (58%), Gaps = 6/301 (1%)

Query: 52  LIVLVLSLAIFGMTLGGKFFSAFSLTLILQQVAIVGIVGAAQSLVILTAGIDLSVGAIMV 111
           LI L++ +AI   T+   FF+  +L  ILQQ ++  I+    +LVILT+GIDLSVG+++ 
Sbjct: 23  LIALLVLIAIVS-TMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLA 81

Query: 112 LSSVVMGQFTFRYGLPAELSIICGLAVGAFCGFINGVLVSRMRLPPFIVTLGMWQIVLAT 171
           L+  V         + A +++   LA+GA  G + GV+V++ R+  FI TL M  ++   
Sbjct: 82  LTGAVAASIV-GIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGV 140

Query: 172 NFLYSANETIRAQDIVQQAPILQFFGNNIRIGNAVFTYGVLAMVLLVALLWYVLNRTAWG 231
             +Y+    +        A +  +FG    +G     + ++A+V L A  WY+L+ T  G
Sbjct: 141 TMVYTNGSPVNT-GFTDNADLFGWFGIGRPLGIPTPVW-IMAIVFLAA--WYMLHHTRLG 196

Query: 232 RHLYAVGDDPDAAELAGVNVKRMLTTVYTLSGLICAFAGWALIGRIGSVSPTAGQFANIE 291
           R++YA+G +  A  L+G++V ++   VY+L G++ + AG   + R+ S  PTAG    ++
Sbjct: 197 RYIYALGGNEAATRLSGISVNKVKIIVYSLCGMLASLAGIIEVARLSSAQPTAGTGYELD 256

Query: 292 SITAVVIGGISLFGGRGSIMGMIFGALIVGVFSLGLRLIGTDPQWTYLLIGVLIILAVAI 351
           +I AVV+GG SL GG+G I+G + GALI+G  + GL L+G    +  ++  V+I+LAV +
Sbjct: 257 AIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLV 316

Query: 352 D 352
           D
Sbjct: 317 D 317