Pairwise Alignments

Query, 340 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 337 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  480 bits (1235), Expect = e-140
 Identities = 239/333 (71%), Positives = 275/333 (82%)

Query: 8   LLGALALGVSFASAASAADTSVCLITKTDTNPFFVKMKEGATAKAKELGVTLKSYAGKID 67
           +LG      + + AA A  TS CLITKTDTNPFFVKM+EGA AKA+ELGV LK++AGK D
Sbjct: 5   MLGTALACATMSGAALADTTSACLITKTDTNPFFVKMREGAVAKAEELGVELKTFAGKFD 64

Query: 68  GDSESQVAAIETCIADGAKGILITASDTKGIVPAVQKARDAGLLVIALDTPLEPVDAADS 127
           GD E+QV AIETCI DGAKGILITASDT  I  AVQ+ARDAGL+VIALDTPL P DAAD+
Sbjct: 65  GDHETQVQAIETCILDGAKGILITASDTSSITGAVQQARDAGLVVIALDTPLTPADAADA 124

Query: 128 TFATDNLLAGELIGKWAAGTLGDKAKDAKIAFLNLTPSQPTVDVLRNQGFMKGFGIDVKD 187
           TFATDN +AG LIG+WA   +GD A DAKIA LN+  SQPTV VLRNQGF++GFGID+ D
Sbjct: 125 TFATDNYVAGLLIGQWARAQMGDAAADAKIAMLNIQVSQPTVGVLRNQGFLEGFGIDIGD 184

Query: 188 INKIGDEDDKRIVGHDVTNGNEEGGRSAMENLLQKDPTINVVHTINEPAAAGAYEALKAV 247
            N+ GDE D RIVG DVT G+EEGGR+AMEN+L  DP +NVV+TINEPAAAGAYEALKA+
Sbjct: 185 PNRWGDETDPRIVGQDVTQGSEEGGRAAMENILAADPMVNVVYTINEPAAAGAYEALKAI 244

Query: 248 GREKDVLIVSVDGGCPGVKNVAEGVIGATSQQYPLLMAALGVEAVKKFADTGEKPKPTAG 307
           GRE DVLIVSVDGGCPGV+NVA+GVIGATSQQYPLLMA+LG+EA+K +A+TGEKP PT G
Sbjct: 245 GRENDVLIVSVDGGCPGVQNVADGVIGATSQQYPLLMASLGIEAIKTWAETGEKPAPTPG 304

Query: 308 KNFFDTGVTLVTDKPVKGLDSIDTKEGLKKCWG 340
           K+FFDTGV LVTD P  G++SI  +EG   CWG
Sbjct: 305 KDFFDTGVALVTDTPADGVESISVEEGRNLCWG 337