Pairwise Alignments

Query, 596 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 455 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  110 bits (276), Expect = 1e-28
 Identities = 88/317 (27%), Positives = 157/317 (49%), Gaps = 26/317 (8%)

Query: 276 AERLAIMRVFGIATLVNIVLSLLLSSTIATPLRRLSAAAIRVRRGARTREEIPDFSARQD 335
           AE +A+     +A L++ +L  LL+  +  PLR L  +A  V  G          +AR+D
Sbjct: 161 AENIAL--TLTLAILLSGLLCGLLAWHLGKPLRALKQSAEAVASGDLGHRADASTTARKD 218

Query: 336 EIGNLSIALREMTTALYDRIDAIESFAADVSHELKNPLTSLRSAVETLPRAKTEESKQRL 395
           EIG L+ +   M  A+   +++ +   +D+SHEL+ PLT L+ A+     A T +  Q  
Sbjct: 219 EIGQLAQSFNAMADAIESMVNSQQRLISDISHELRTPLTRLQLAL-----ALTRKKGQAS 273

Query: 396 TEI--IFHDVRRLDRLISDISDASRLDAELARADASPLDLDVLMKGLVDISRQISTKKKS 453
           TEI  I ++  +L+ +I+++ + SR+  ++          + L + L D   +   ++KS
Sbjct: 274 TEIDRIGYEAEQLEAMIAELLELSRVKLDIHEHKHRLSLAETLGQVLDDAEFEAEQQQKS 333

Query: 454 VAIDYVADRKAGAKTSFVVNGHDLRIGQIVTNLIENARSFVSEESGRITVRLSRHKDRCI 513
           + ID           S ++  +   + + + NL+ NA  +  +E   I++  +   ++ I
Sbjct: 334 LVID--------IDDSLMLMLNPRPLARAIENLLRNAIRYAEQE---ISISATAEPEQVI 382

Query: 514 VQVEDNGPGIQAE-DIDRIFERFYTDRPASEGFGQNSGLGLSISRQIAEAHGGSLRAENV 572
           + ++D+GPGI+ E D+  IFE FY  + A E      GLGL+I++   +AH G + A N 
Sbjct: 383 LTIKDDGPGIEDEADLQAIFEPFYRPQSARERESGGWGLGLAIAKAAIQAHQGQIVASNA 442

Query: 573 VDKYGVISGARFTLSLP 589
                   G   T+ LP
Sbjct: 443 AP-----HGLEITIRLP 454