Pairwise Alignments

Query, 596 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  106 bits (265), Expect = 3e-27
 Identities = 93/357 (26%), Positives = 162/357 (45%), Gaps = 41/357 (11%)

Query: 257 VLGVLLLSTQAGDIDKIVHAERLAIMRVFGIATLVNIVLSLLLSSTIATPLRRLSAAAIR 316
           ++G+L + T       +    R     V  I  L+ +++S L++  I  PL +L   A  
Sbjct: 294 IIGMLFVGTPESKFLALQADVRNQTFVVGLIGLLIALIVSYLINRGIIKPLEQLKQGAEW 353

Query: 317 VRRGARTREEIPDFSARQDEIGNLSIALREMTTALYDRIDAIESFAAD------------ 364
           V  G   ++ I D     DE G L+ A  +M T +    D ++  A +            
Sbjct: 354 VSNGRYDQKVIVD---SDDEFGELAKAFNKMATQINISDDKLKKHAEELKISYNELKELD 410

Query: 365 ---------VSHELKNPLTSLRSAVETL---PRAKTEESKQRLTEIIFHDVRRLDRLISD 412
                    VSHEL+ PLTS++  VE +         +S+++  ++   ++ RL RLI  
Sbjct: 411 KLKSELIAVVSHELRTPLTSIKGYVELVLDGTMGAINDSQKKCLQVADDNIVRLRRLIES 470

Query: 413 ISDASRLDAELARADASPLDLDVLMKGLVDISRQISTKKKSVAIDYVADRKAGAKTSFVV 472
           + D S+++          ++L  ++  +++  + ++T+K       V D          +
Sbjct: 471 MLDLSKIERGELEMYREKVNLRSIVCDVIEYLKPLATEKNIKLNKEVED--------IAI 522

Query: 473 NGHDLRIGQIVTNLIENARSFVSEESGRITVRLSRHKDRCIVQVEDNGPGIQAEDIDRIF 532
                RI Q++TNLIENA  F S  +  I V      +   ++V D G GI  +D+++IF
Sbjct: 523 EADKDRITQVLTNLIENAIKF-SPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIF 581

Query: 533 ERFYTDRPASEGFGQNSGLGLSISRQIAEAHGGSLRAENVVDKYGVISGARFTLSLP 589
            RFY    +++     SGLGL++ + I EAH GS+  E+ + K     G+ F + LP
Sbjct: 582 NRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGK-----GSTFHIILP 633