Pairwise Alignments

Query, 596 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 614 a.a., ATP-binding protein from Methanococcus maripaludis JJ

 Score =  103 bits (258), Expect = 2e-26
 Identities = 88/343 (25%), Positives = 166/343 (48%), Gaps = 36/343 (10%)

Query: 257 VLGVLLLSTQAGDIDKIVHAERLAIMRVFGIA---TLVNIVLSLLLSSTIATPLRRLSAA 313
           V+G+  + T       ++++    I ++F IA    ++ + ++++L+  I   +++L  +
Sbjct: 272 VIGMTCVGTPKSPFTVLLNS---VIQKIFFIAFSSLIIAVFVAVILNKKIVDSIKKLKNS 328

Query: 314 AIRVRRG-------ARTREEIPD----FSARQDEIGNLSIALREMTTAL---YDRIDAIE 359
           A    RG         T +E+ +    F+   DEI      L+     L   +D +  ++
Sbjct: 329 AESFGRGNYDERASIDTGDELEELAESFNKMADEIRKSDKKLKSDAHTLKTSFDELKEVD 388

Query: 360 SFAAD----VSHELKNPLTSLRSAVETLP---RAKTEESKQRLTEIIFHDVRRLDRLISD 412
           +  ++    VSHEL+ PLT++   VE L      K  E ++    +I  +  RL R+  +
Sbjct: 389 NLKSEILSIVSHELRTPLTAILGYVELLKDETAGKLSEKQKEFISVISENSDRLKRITDN 448

Query: 413 ISDASRLDAELARADASPLDLDVLMKGLVDISRQISTKKKSVAIDYVADRKAGAKTSFVV 472
           +SD   +D ++       ++L    K + DI R      +S  I  + D       +  +
Sbjct: 449 MSDLVTVDNKILDIKRDKINLK---KEVNDILRSFDYFAESKNIVLLED-----VDNLDI 500

Query: 473 NGHDLRIGQIVTNLIENARSFVSEESGRITVRLSRHKDRCIVQVEDNGPGIQAEDIDRIF 532
            G   +I Q+++NLIENA  F S++  ++TV     K    +++ D GPGI  E + +IF
Sbjct: 501 KGDKSKIHQVLSNLIENAIKF-SKKQTKVTVMGFEDKGNIHLEITDQGPGIPKEHLGKIF 559

Query: 533 ERFYTDRPASEGFGQNSGLGLSISRQIAEAHGGSLRAENVVDK 575
           ++FY    +S+     SGLGL++ ++I E+HGGS+  E+ + K
Sbjct: 560 DKFYQIDSSSKREVGGSGLGLAVCKKIVESHGGSIWVESKIGK 602