Pairwise Alignments

Query, 881 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 856 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  129 bits (323), Expect = 1e-33
 Identities = 74/228 (32%), Positives = 119/228 (52%), Gaps = 3/228 (1%)

Query: 645 KADELKNDFVQHVSYELRSPLTNIIGFTDLLKTPGIGQLTERQAEYLDHISTSSSVLLTI 704
           + +++KNDFV  VS+ELR+PLT+I G   L+    +G       + L+    +S  L  +
Sbjct: 490 RVEQMKNDFVSTVSHELRTPLTSISGALGLIVGGALGSAPASMQQMLEIAYRNSLRLGHL 549

Query: 705 VNDILDLATVDAGIMQLNYSDNDLNELLDDVSVQIADRLQESGISLEIVAPAHLGSLVAD 764
           +ND+LD+  + AG M     ++ L +LL++         ++ GI   +  P  +  +  D
Sbjct: 550 INDLLDMEKIAAGKMSFELREHSLGDLLEESLASNQALCEQHGIRCSLDHPVDV-LVWVD 608

Query: 765 HQRLKQILIKLLTNAINFAPEGSSVQLSCQRSEGDFVFSVADKGPGIPEDMLKSVFDRF- 823
             RL+Q+L   L+NA+ F P+G  ++L           SV D+GPGIPE     VF++F 
Sbjct: 609 GMRLQQVLGNFLSNAVKFTPQGGEIRLHSSLRGPRVRISVTDQGPGIPEAFRSRVFEKFA 668

Query: 824 -ATRGNGGRRTGAGLGLSIVESFVSLHHGTVSIDSRPGNGTIVTCRIP 870
            A   +  +++G GLGL+I +  +    GTV  D  PG GT   C +P
Sbjct: 669 QADASDSRQKSGTGLGLAITKELIERMGGTVGFDCPPGQGTTFWCELP 716