Pairwise Alignments

Query, 881 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (315), Expect = 1e-32
 Identities = 86/264 (32%), Positives = 142/264 (53%), Gaps = 18/264 (6%)

Query: 624 VNMTDSVRAERALKEKNDALLKADELKNDFVQHVSYELRSPLTNIIGFTDL-LKTPGIGQ 682
           ++MT+    E  L++  +A     + K DF+ ++S+E+R+P+  I+G   L L TP    
Sbjct: 581 LDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTP---- 636

Query: 683 LTERQAEYLDHISTSSSVLLTIVNDILDLATVDAGIMQLNYSDNDLNELLDDVSVQIADR 742
           L   Q +Y+  I+ S+  LL I+NDILD + ++AG + +   D +L+++LD+V+  ++ +
Sbjct: 637 LDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLK 696

Query: 743 LQESGISLEIVAPAHLG-SLVADHQRLKQILIKLLTNAINFAPEGSSVQLSCQRSEGD-- 799
            QE GI   +    H+   L+ D  RL Q+++ L  NA+ F  +G  V LS + S+ +  
Sbjct: 697 AQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIV-LSARVSQLNEQ 755

Query: 800 ---FVFSVADKGPGIPEDMLKSVFDRFATRGNGGRRT--GAGLGLSIVESFVSLHHGTVS 854
                F+V D G GI +D L  +FD F+   N   R   G GLGLSI +  V L  G ++
Sbjct: 756 QVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQIT 815

Query: 855 IDSRPGNGTI----VTCRIPSATL 874
           + S  G G+     V C +  A +
Sbjct: 816 VHSEEGKGSTFEFSVVCGLQDAKM 839



 Score = 35.0 bits (79), Expect = 3e-05
 Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 16/141 (11%)

Query: 258 AELQVERERLLASVSTF-QELLDSIEQPVWRRNGEGELTWVNHAYAHAVDARNAEQAVQE 316
           AE Q   ER +   S   QE+LD+   P++  + +G+   VN  +   +   N E   +E
Sbjct: 457 AEQQRLAERKVLEQSQLNQEILDATPNPMYCLSADGKFLTVNAKFLDLMGLYNNEVIDKE 516

Query: 317 KRELLNTVTRQKIRAA----ATPESPYHDRISTV---------VSGNRSFFDVVDIKTAG 363
            +E+      ++  AA       +S  +  +S V         +    SF D  D     
Sbjct: 517 PQEIFPAEVAERFAAAHQVLTQQQSSQNYEVSLVDYTGVQREMLVYEASFSDRAD--KVN 574

Query: 364 GSAGIAIDATEAETIREELKR 384
           G  GI +D TE + + +EL++
Sbjct: 575 GIVGILLDMTERKEMEDELRK 595