Pairwise Alignments

Query, 1185 a.a., ATP-dependant DNA helicase from Agrobacterium fabrum C58

Subject, 1189 a.a., ATP-dependent nuclease/helicase from Sinorhizobium meliloti 1021

 Score = 1307 bits (3383), Expect = 0.0
 Identities = 694/1184 (58%), Positives = 837/1184 (70%), Gaps = 8/1184 (0%)

Query: 9    GPAADTPESWIDWTSARQRLASDPASSAWVSANAGSGKTHVLTQRVIRLLLAGCRPSAIL 68
            GP   +PE W+DWT+ RQ LASDPA SAWVSANAGSGKTHVLTQRVIRLLLAGCRPSAIL
Sbjct: 7    GPEERSPEGWLDWTTQRQALASDPACSAWVSANAGSGKTHVLTQRVIRLLLAGCRPSAIL 66

Query: 69   CLTYTKAAASEMSSRVFDRLAEWATLPDSDLKDRITTIEGKVPDRIKLAEARRLFAKALE 128
            CLTYTKAAASEMS+RVF++LAEWATL D+ L+ RI  IEGK P   K+ EARRLFA+ALE
Sbjct: 67   CLTYTKAAASEMSNRVFEKLAEWATLDDTTLEKRIEAIEGKRPPTAKIQEARRLFARALE 126

Query: 129  TPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAATTLLAEARRSLLTAVSTEDDA 188
            TPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAA  LLA+ARR+LLTA +   D 
Sbjct: 127  TPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAVLLADARRALLTATAAASDG 186

Query: 189  ELVQALAYVLDLADESGLEALLSAIIANRSALRSFLHEAKQSGGLDVRLRQEMQIAAGET 248
            EL +A A VLDLAD++GLE LL+AI+ANR+ +++FL  A   GG++  LR  + +  GET
Sbjct: 187  ELAEAFATVLDLADDTGLEKLLAAIVANRAPIQAFLDHASGRGGMEAHLRAALGLEPGET 246

Query: 249  EETAAEAFWPLPGLSGLVLDTYLTLADEVGGSRVIEVAYALREAKRQPDPVRRMELIEAA 308
              T   A WPL GL+G  LD Y+ L   +GG++   +A  LR  +   D   R   +   
Sbjct: 247  AGTVMAAVWPLAGLNGPALDDYIDLGLRLGGAKPSAIADGLRAVRAIDDAATRYSKLVEL 306

Query: 309  LLTAKGEKKSDAYVINKGMQKSAPDLVDALTLARDHVVACRNRYRLVRMLVATKSALVLA 368
                 G+ K+++  +N  M+++AP L   +  AR H++AC +R  +V+M  AT++ALVLA
Sbjct: 307  FFNGGGKPKAESAFLNAAMRRAAPQLELRVEEARSHMLACVDRLSIVQMYGATRAALVLA 366

Query: 369  ERLIGDFEDLKKQRSQLDFEDLIERAANLLNRDTAGAWVHYKLDQGIDHILVDEAQDTSP 428
            ERL  D+E LKK RSQLDFEDLI R A LL R   GAWVHYKLDQGIDHILVDEAQDTSP
Sbjct: 367  ERLNRDYEALKKARSQLDFEDLIHRTAALLARSDVGAWVHYKLDQGIDHILVDEAQDTSP 426

Query: 429  VQWSIIQSLAADFFNGESARMGRRTLFAVGDEKQSIYSFQGARPERFSQERDETKRRVDQ 488
             QW+IIQSLAADFF GE+AR   RT+FAVGDEKQSIYSFQGARPERFS+E   T+RRV  
Sbjct: 427  AQWTIIQSLAADFFAGETARADDRTIFAVGDEKQSIYSFQGARPERFSRESTLTERRVRA 486

Query: 489  VEQAFHRIRLPLSFRSTEDVLAAVDQVFSDPKNASGLSADNEPVEHRSNRAGHPGTVEVW 548
              + F  IRL LSFRST DVL+AVD VF++P NA GLSA +E + H SNR G PG V++W
Sbjct: 487  GNKHFSPIRLQLSFRSTVDVLSAVDTVFANPGNARGLSARSEAIVHASNRIGQPGAVDLW 546

Query: 549  DMVAPETTEDEEDWTAPFDALRESAPATIVARRIAARIADMIGNQTIIEKGVERAVEPGD 608
            D++APE    EEDWTAPFDA  E AP  I+ARRIAA + D IG +T+IEKGV RA+ PGD
Sbjct: 547  DVIAPEPAASEEDWTAPFDATPERAPVNILARRIAAVLEDWIGRETVIEKGVRRAMRPGD 606

Query: 609  ILVLVRKRAAFVNALTRELKRRKNIPVAGADRLRLTDHIAVQDLLALGRFVVLPEDDLSL 668
            ++VLVRKR AFVNALTR LKRR NIPVAGADRL LT HIAVQDL+ALGRFV+LPEDDLSL
Sbjct: 607  VIVLVRKRDAFVNALTRALKRRGNIPVAGADRLVLTSHIAVQDLIALGRFVLLPEDDLSL 666

Query: 669  AALLKSPLFNLTEDDVFEIAATRSEAESVWQRLQVLSGEETSRLSIVTDKLRHFISLSKT 728
            AALLKSPL +L E+DVFE+AA R+E ES+W+RL+    EETSR       L  +  L++ 
Sbjct: 667  AALLKSPLLDLGEEDVFELAARRTEGESLWRRLRQAGAEETSRYHEAVRTLSRYSGLARE 726

Query: 729  ATVHDFFAAVLTLHDGRKKFLGRLGNEASDVLDEFLSFALDHERTGLPGLQAFLSVLETD 788
               HDF+A VL    GR+ FL RLG+E SD+LDEFL+FALDHER GLPGLQAF+S LE +
Sbjct: 727  LLPHDFYARVLGADGGRRAFLARLGSEVSDILDEFLTFALDHERNGLPGLQAFISTLEIE 786

Query: 789  SPEVKREQDKDRGEVRIMTVHASKGLEAPVVFVVDGGSKAFNHSHVPKLRF-----VEGD 843
            +P VKREQDK+R EVR+MTVHA+KGLEAPVVF+VDGG +AF    V  LRF     V+  
Sbjct: 787  APTVKREQDKERDEVRVMTVHAAKGLEAPVVFLVDGGGEAFVRQQVSDLRFLEKAQVDHS 846

Query: 844  GDAFPVWLPGSGFSNHLIRSDEERLKTAAEDEYRRLLYVAMTRAADHLVVCGYRGQKENP 903
                PVW       N LI +D ERLK  AE+EYRRLLYV MTRAAD L+VCGYRGQ++N 
Sbjct: 847  TLTVPVWRAPGSAPNSLIAADNERLKKLAEEEYRRLLYVGMTRAADRLIVCGYRGQRQNT 906

Query: 904  ECWHAIVKAALAEN-QDHCQPQAFSADGEEWQGLVWRKSEA-RPALAPHKPAEPQQEEDH 961
            + WH++V+  LA++ +    P+ F A  EEWQG+ WR++   R        +E  Q    
Sbjct: 907  DTWHSMVQGTLAQDLKGRGTPRLFRAGSEEWQGIAWREAHVPRDLPTSEGRSEESQRPTA 966

Query: 962  TLPPGLLAPLPALPSLPRPLSPSGAGTIIDDGADDLAVRSPLFGEKTEASSLALQRGKLV 1021
             LP  L  P  A   LPRPL+PSG    IDD   +  V S LF  K+ A   ++ RG ++
Sbjct: 967  GLPTALFTPPAAPRRLPRPLAPSGTTIAIDDPDAEAIVGSALFAGKS-APKFSMLRGAIL 1025

Query: 1022 HRMLQALPDFAESEREEAARRYAERAARFWPATDRERLIQAVLRVLSEPAVQPAFSANSR 1081
            HR+LQ LP     ER  AA RY  R+   WP  +R  L   V+ VL    +QP F  +SR
Sbjct: 1026 HRLLQVLPSVDGPERLAAAERYLARSVPRWPEAERRALAGTVMDVLDHADLQPLFGEHSR 1085

Query: 1082 AEVSIMGTMTLGRQHYAVSGRIDRLAVERDRVILVDYKTNRVPPREARELPFSHVAQLAI 1141
            AEVS+MGT+ LG + +AVSGRIDRLAV  D V + DYKTNR  P    E+   +  QLAI
Sbjct: 1086 AEVSVMGTLKLGVREFAVSGRIDRLAVTGDMVTIADYKTNREIPETPEEIAPVYRNQLAI 1145

Query: 1142 YREILAPLYPGKEFVCALIYTESAAFVRVDDDAMAEALAAIKTK 1185
            YRE+L PLYPGK F C LI+TE  A   + +  +  +L  + TK
Sbjct: 1146 YRELLKPLYPGKRFRCVLIFTEGPAIRVLPEPMLDRSLEELATK 1189