Pairwise Alignments

Query, 1185 a.a., ATP-dependant DNA helicase from Agrobacterium fabrum C58

Subject, 689 a.a., UvrD2 DNA helicase from Sinorhizobium meliloti 1021

 Score = 70.5 bits (171), Expect = 4e-16
 Identities = 127/537 (23%), Positives = 209/537 (38%), Gaps = 121/537 (22%)

Query: 369 ERLIGDFEDLKKQRSQLDFEDLIERAANLLNRDTAGAWVHYKLDQGIDHILVDEAQDTSP 428
           + L   + + K+ ++ LD++DL+   A +++     A +   +    D++LVDE QDT+ 
Sbjct: 194 QELFAGYVEAKQAQNVLDYDDLLLYWAQMVS----DASLADDIGNRFDYVLVDEYQDTNK 249

Query: 429 VQWSIIQSLAADFFNGESARMGRRTLFAVGDEKQSIYSFQGARPERFSQERDETKRRV-- 486
           +Q S++ +L  D           R L  VGD+ QSIYSF+ A           T R +  
Sbjct: 250 LQSSVLLALKPD----------GRGLTVVGDDAQSIYSFRAA-----------TVRNILD 288

Query: 487 --DQVEQAFHRIRLPLSFRSTEDVLAAVDQV--FSDPKNASGLSADNEPVEHRSNRAGHP 542
              Q   A   + L  ++RST+ +LAA + V   +  +    L  D E  E        P
Sbjct: 289 FPKQFAPAAEIVTLDRNYRSTQPILAAANGVIDLARERFTKNLWTDRESAE-------RP 341

Query: 543 GTVEVWDMVAPETTEDEEDWTAPFDALRESAPATIVARRIAARIADMIGNQTIIEKGVER 602
             +         T +DE D               IV + +A R + M+  Q  +      
Sbjct: 342 KLL---------TVKDEAD-----------QANCIVEQVLANRESGMLLKQQAV------ 375

Query: 603 AVEPGDILVLVRKRAAFVNALTRELKRRKNIPVAGADRLRLTDHIAVQDLLALGRFVVLP 662
                     + + ++    L  EL RR NIP      L+  D   V+D+LA+ RF   P
Sbjct: 376 ----------LFRTSSHSGPLEVELTRR-NIPFVKFGGLKFLDSAHVKDMLAVLRFAQNP 424

Query: 663 EDDLSLAALLK--SPLFNLTEDDVFEIAATRSEAESVWQRLQVLSGEETSRLSIVTDKLR 720
            D ++   LL+    +   T   + +  A   E       +       T  +S+V  +L 
Sbjct: 425 RDRVAGFRLLQMLPGVGPQTAGKILDTIAADPEPLMALGEVPAPPRSGTDWMSLV--ELL 482

Query: 721 HFISLSKTATVHDFFAAVLTLHDGRKKFLGRLGNEASDVLDEFLSFALDHERTGLPGLQA 780
             +    +A   +   A +      ++         +D++       L+    G P  + 
Sbjct: 483 QALRKPGSAWPTEIEMARMWYEPHLERIHEDAETRRADLVQ------LEQIAAGYPSRER 536

Query: 781 FLSVLETDSPEVKREQD----KDRGEVRIMTVHASKGLEAPVVFVVDGGSKAFNHSHVPK 836
           FL+ L  D P+   +Q      D   + + T+H++KG E   VF+               
Sbjct: 537 FLTELTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRSVFM--------------- 581

Query: 837 LRFVEGDGDAFPVWLPGSGFSNHLIRSDEERLKTAAEDEYRRLLYVAMTRAADHLVV 893
           L  V+G     P  L  +G S+ L             +E RRLLYV MTRA D L +
Sbjct: 582 LNVVDG---CIPSDL-ATGTSHEL-------------EEERRLLYVGMTRAKDQLAL 621



 Score = 47.8 bits (112), Expect = 3e-09
 Identities = 23/47 (48%), Positives = 32/47 (68%)

Query: 38 VSANAGSGKTHVLTQRVIRLLLAGCRPSAILCLTYTKAAASEMSSRV 84
          + A AGSGKT+ L  RV  L++ G  P  IL +T+++ AA+EMS RV
Sbjct: 35 IIAGAGSGKTNTLAHRVAHLIVNGADPRRILLMTFSRRAAAEMSRRV 81