Pairwise Alignments

Query, 398 a.a., intracellular PHB depolymerase from Agrobacterium fabrum C58

Subject, 418 a.a., Polyhydroxyalkanoate depolymerase (NCBI) from Rhodospirillum rubrum S1H

 Score =  439 bits (1130), Expect = e-128
 Identities = 217/392 (55%), Positives = 270/392 (68%), Gaps = 1/392 (0%)

Query: 1   MAPLRAGADMMRQACNNPLNPLSSTAFGRSLDAGFEVFERLTRRYVKPEFDLGSTSVDGQ 60
           + P R  A  +      P  P S T  GRS+ AG  VFER+TRRY KP F L  T V G+
Sbjct: 13  LMPWRVAAHSVHTLYTCPWVPASYTKMGRSIAAGAAVFERVTRRYGKPRFGLDHTVVAGE 72

Query: 61  TVVVTDETVWSRPFCSLVHFNRDLEPTRKPDPKVLLVAPMSGHYATLLRGTVEALLPSAD 120
            V V + TV   PFC LVHF R   P     P++L+VAP+SGHYATLLRGTVEALLP  D
Sbjct: 73  RVWVEEITVHDLPFCDLVHFTRGC-PESVKQPRLLVVAPLSGHYATLLRGTVEALLPDHD 131

Query: 121 IYITDWADARIVPATEGTFDLDDYIDYVIEMLRHIGPGAHVVAVCQPSVPVLAAVSLMEA 180
           +YITDW +AR VP  EG F  D Y+DY+   L  +GP  H++AVCQPSVPVL   +LM  
Sbjct: 132 VYITDWINAREVPIEEGAFGFDTYVDYLRAFLTFLGPDTHLLAVCQPSVPVLTTAALMAE 191

Query: 181 DGDTFAPASMTLMGGPIDTRINPTAVNGLATAKPIEWFRDNVVMQVPWPQPAFGRYVYPG 240
           DGD   P SMTLMGGP+DTRINPT VN  A +  + WF   ++  VP P    GR VYPG
Sbjct: 192 DGDACRPLSMTLMGGPLDTRINPTEVNRFADSHDMAWFEKKLIHTVPAPYLGRGRKVYPG 251

Query: 241 FLQLSGFMSMNLDKHMTAHKDFYLNLVKNDGDSAEKHREFYDEYLAVMDLTAEFYLQTVE 300
           FLQLSGFM+MN D+H+ AH D++ +L++ DGDSA++HR+FYDEYL+VMDL AEFYL+TVE
Sbjct: 252 FLQLSGFMAMNFDRHVNAHLDYFTHLIEGDGDSADQHRDFYDEYLSVMDLPAEFYLETVE 311

Query: 301 TVFIDHALPKGNMLHRGRAVDPTAIHNVALFTVEGENDDISGVGQTKAAHDLCRNIPEDK 360
            +F +H L +G ++  GR VD  AI ++ L T+EGE DDI+G GQT AAH LC N+P+  
Sbjct: 312 RIFKNHELAEGKLVVNGRRVDTGAITDIRLLTIEGERDDITGKGQTAAAHTLCANLPQAL 371

Query: 361 RAHYMQPDVGHYGVFNGSRFRKEIVPRMLDFI 392
           R H +QP VGHYG+FNG R+R+EI+P +  FI
Sbjct: 372 RDHRLQPKVGHYGIFNGRRWREEILPHVRAFI 403