Pairwise Alignments

Query, 232 a.a., DNA polymerase III, epsilon chain from Agrobacterium fabrum C58

Subject, 204 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score = 68.6 bits (166), Expect = 9e-17
 Identities = 57/165 (34%), Positives = 80/165 (48%), Gaps = 7/165 (4%)

Query: 4   IIFDTETTGLES-KLDRVIEIGGIELINHFPTGRTLHLYISPEDRKVHPDALAVHGITDE 62
           ++ D ETTGL   + DR IEIG ++L       R   L ++P    V        GIT+ 
Sbjct: 7   VVLDFETTGLSPLQGDRAIEIGAVKLQQGVVVDRFQQL-MNP-GFAVSSFIADYTGITNA 64

Query: 63  FLKDKPKFAEVIDQIREFFDGARWVAHNATFDMGFINAEFARLGIEPVSAELVTDTLSLA 122
            L D P    V+    +F  G   VAHNA+FD  F+ AEFAR+ +E   ++    +L LA
Sbjct: 65  MLSDAPSCETVMADFADFIQGCHLVAHNASFDQKFLTAEFARIDLE--QSQPFACSLLLA 122

Query: 123 RRKNPMGPN-SLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEM 166
           RR     PN  L  L    GI N     H AL D+E+   +++ +
Sbjct: 123 RRLFQAVPNHQLGTLVNYLGIAND-GVFHRALNDAEVTGALWLAL 166