Pairwise Alignments

Query, 272 a.a., Formamidopyrimidine-DNA glycosylase from Acinetobacter radioresistens SK82

Subject, 271 a.a., formamidopyrimidine-DNA glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  254 bits (650), Expect = 1e-72
 Identities = 131/270 (48%), Positives = 177/270 (65%), Gaps = 3/270 (1%)

Query: 1   MPELPEVETTKKSLEP-LLQQKVMSVEVREPRLRWAIPQDIQKLQGQKLIRLNRRSKYIL 59
           MPELPEVE T++ + P L+ Q V+ + VR P LRW +P+  +++ GQ + ++ RR+KY+L
Sbjct: 1   MPELPEVEVTRQGITPYLVDQTVVDLIVRNPSLRWPVPELAKQIIGQTIRQVRRRAKYLL 60

Query: 60  AQFEHDTMLWHLGMSGSFRLCEPATELRKHDHLIISFENIQ-LRYHDPRRFGCILWLN-H 117
              +  T + HLGMSGS R+    T + KHDH+ +   N + LR++DPRRFG  LW    
Sbjct: 61  IDTDAGTSIVHLGMSGSLRILPHDTPVEKHDHIDLVLANGRILRFNDPRRFGAWLWCQLP 120

Query: 118 ETQNKLIDPLGPEPLSEAFNTEYLVNKLKNKQVGIKVALMDNHVVVGVGNIYATESLFNT 177
           E  + L++ LGPEPL++AFN   L   L  K+  IK+ LMDNH+VVGVGNIYA E+LF  
Sbjct: 121 EEAHPLLEKLGPEPLTDAFNVNQLAASLAGKKKAIKLCLMDNHIVVGVGNIYANEALFAA 180

Query: 178 RIHPAQPASSLSYEQIDQLVIEIKRILKFAIELGGSTLRDYSNAAGENGYFQQTLLAYGR 237
            IHP   A  +  E++  LV E+K+IL  AI+ GG+TL+D++NA G+ GYF Q L  YGR
Sbjct: 181 GIHPEAEAGKIDIERLTVLVAEVKQILAHAIKQGGTTLKDFTNADGKPGYFAQKLHVYGR 240

Query: 238 EGEMCINCETPLQNIRLGQRASVFCPECQP 267
            GE C  C   L  IRLGQR +VFC  CQP
Sbjct: 241 GGETCTQCGNLLSEIRLGQRTTVFCSICQP 270