Pairwise Alignments

Query, 491 a.a., Amino-acid carrier protein AlsT from Acinetobacter radioresistens SK82

Subject, 488 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  435 bits (1118), Expect = e-126
 Identities = 231/483 (47%), Positives = 324/483 (67%), Gaps = 23/483 (4%)

Query: 13  VSFFNDPLWDFLVVF-LVVVGVFYTLLTGAVQIRLFLHSIRVMKGSRKEGDDQHGITPFQ 71
           V+F N  LW  L+V+ LV  G+++TL    +Q+  F HS+++M  SR+  +   G++ FQ
Sbjct: 6   VNFLNALLWGKLLVYGLVGAGLYFTLRLVFIQLTHFKHSLKIMTMSRQGCES--GLSSFQ 63

Query: 72  AFVTGLASRVGVGNVAGVAIAIAIGGPGAVFWMWFTAFLGMSSAFVESSLAQLFKVRDHQ 131
            F T +A+RVG GN+AGVA+AI   GPGAVFWMW  A LGM++A VES+LAQ++KVRD  
Sbjct: 64  VFCTSMAARVGAGNMAGVAVAIGAAGPGAVFWMWLIAMLGMATAMVESTLAQVYKVRD-A 122

Query: 132 NQQFRGGPAYYITQGLKQKWLGVVFALSLILAYGFVFNAVQANSIVDATAHAWGWDRANI 191
           N QFRGGP+YY+ +GL Q+W+GV+FA  LI+A+G VFNAVQAN+I  A    +G      
Sbjct: 123 NGQFRGGPSYYMEKGLGQRWMGVLFAFFLIIAFGLVFNAVQANTITGAMERVFG------ 176

Query: 192 MLDLGGLGFEVSWVGVVLVIMTAAIIFGGIKRIAVVAERMVPLMAVLYLAVALYIAIINF 251
                   F+ ++VG+ LV+ +  +I GG++++A V+E +VP+MA+ Y+ +A  I + N 
Sbjct: 177 --------FDPTYVGIGLVLASGFVIMGGLRKVARVSEFIVPIMALAYILIAFIIVLFNL 228

Query: 252 SILPDIFKLIFTEAFKFDAAAGGFFGAMVSMAMMQGIKRGLFSNEAGMGSAPNAAAAS-- 309
             LP +  LI   AF +  AA G     V+ AM  GI RGLFSNEAGMGSA N AA++  
Sbjct: 229 EQLPAVISLIVKSAFGWQEAAAGGVAYTVAQAMQAGIARGLFSNEAGMGSAANVAASASP 288

Query: 310 DVKHPVDQGLVQMLGVFVDTFVVCSCTAIIILASGLYHEAGFEGVTLTQMALVSQIGSWG 369
           +  HP  QG VQM+GVFVDT V+C+ TA IIL SG    +  +G+ LT  A+ + +G WG
Sbjct: 289 NPNHPASQGFVQMMGVFVDTIVICTATAAIILLSGDIGSSD-DGIRLTINAMSNHVGDWG 347

Query: 370 DDFLALILFLFAYSSIIGNYAYAESNVQFI-NNQPKVMFVFRLLVLAMVYFGAITSVPLV 428
             F+A+ +FLF ++SII NY+YAE+NV F+  N  K + +FRL VL MV FG++  + LV
Sbjct: 348 GAFIAVAIFLFCFTSIIANYSYAETNVMFLTGNSTKALPLFRLCVLGMVMFGSVAKISLV 407

Query: 429 WSMADLSMGLMATINLFAILLLTPFLRMLLKDYSSQLKKGIKEPEFKIDKYPELKKKVDS 488
           W++AD+SMGLMAT+N+ A+LLL+     ++ DY  QLK G K PEF   K+PEL +++D 
Sbjct: 408 WNLADVSMGLMATVNIVALLLLSGLAIRVINDYCDQLKSG-KMPEFDRSKFPELMEQLDD 466

Query: 489 DIW 491
            IW
Sbjct: 467 GIW 469