Pairwise Alignments

Query, 1626 a.a., putative PAS/PAC sensor protein (RefSeq) from Shewanella sp. ANA-3

Subject, 947 a.a., Signal transduction histidine kinase from Kangiella aquimarina DSM 16071

 Score =  302 bits (773), Expect = 1e-85
 Identities = 177/525 (33%), Positives = 302/525 (57%), Gaps = 17/525 (3%)

Query: 889  AKQEADTANAAKSAFLANMSHEIRTPMNAVLGMLQLMQYTALSVQQQGYVTKAQTAAKSL 948
            A+++A  A+  K+ FLANMSHEIRTPMN V+G  +L+  T L+ +Q+ ++   + +A SL
Sbjct: 290  ARRQALEASRVKTEFLANMSHEIRTPMNGVIGFTELLLKTELNNKQKDFLFDIKRSATSL 349

Query: 949  LGLLNDILDFSKIDAGKLKLDLHPCSIELLMRDLAVVLSANHGNSDVEVMFDLDSALPAW 1008
            L +++DILD+SKI+AGK+  + +P  +   + D+  +L  N     +E++  + S +P  
Sbjct: 350  LSIIDDILDYSKIEAGKMSFERYPFDLRECVDDIFRMLGPNANKKGIELVSLIYSDVPKA 409

Query: 1009 LLADQLRLQQILINLAGNALKFTPHGQVIVGLECLRHEAESVTVQFSIVDSGIGISEEQI 1068
            LL D +R++QI+ NL  NA+KFT  G V +  E      + + ++  + DSGIG+++EQ 
Sbjct: 410  LLGDPIRIKQIITNLVNNAIKFTKSGSVELYAEVESENKKGLKLKIQVKDSGIGLTQEQQ 469

Query: 1069 ERIFTGFEQAESSTSRRFGGTGLGLAISKRLVELMGGQLQVTSKVGVGSRFWFDLTFPVM 1128
              +F  F QA+SST R FGGTGLGL ISK LVE MGG + V S  G GS FWF  T    
Sbjct: 470  RNLFKAFSQADSSTKREFGGTGLGLVISKSLVEKMGGNIGVNSNQGEGSTFWF--TLQCE 527

Query: 1129 EVEANPRADLSG-----YRILVVDDNQITTEILSKILSDYGCVVETASGGYQAIEKVKQA 1183
              +A P   L+G       +LV D +  T   +++IL ++G +V +       + ++   
Sbjct: 528  RTDALPEDGLTGEFLANKSVLVFDPHPSTRLSITQILEEWGMLVRSFEKIDDLMTEIDLY 587

Query: 1184 TANAQQFDVVLMDWRMPDIDGLQTAEMLKNAGTGSYTPLVVMLTAYGHEVIAESQHINNV 1243
            + + +  +++++  +       Q   +   A T  Y P++   TA   + +   +H++++
Sbjct: 588  SQSGKSIELIIIGGQRFRRRQQQLEYICNKAQTQLYCPIITFTTAGNADFL---EHLHSI 644

Query: 1244 PFVNFLTKPVTSQILAEAVLNAIEGKTMDANPKPR-----SQRLLAGLTLLVVEDNQLNR 1298
                 +TKPVT + L  +++  ++  ++ +  +P         LL  + +L V+DN  N 
Sbjct: 645  GVNRAMTKPVTHRALYNSLIELLKTPSIHSGKEPAEAPVGDASLLKDIYVLAVDDNPANL 704

Query: 1299 EVIDELLTYEGATVVLAEGGIEGVTQVLDSGDMFDAVIMDMQMPDIDGLEATRRIRADGR 1358
             ++  LL      V  AE G++ V+  L    ++DA++MD+QMP++DGLEATR IRA+  
Sbjct: 705  RLVTTLLQDLNIKVDAAESGMQAVS--LSKNKVYDAILMDIQMPEMDGLEATRTIRANRT 762

Query: 1359 FDQLPILAMTANASQADKQECLEAGMNAHVSKPIDMQQLLPNILR 1403
                PI+A+TA+A  +++++ LEAGM+ +++KP+  Q L+  +L+
Sbjct: 763  NLNTPIIALTAHAMASEREQLLEAGMDDYMTKPVSEQALVNLLLK 807