Pairwise Alignments

Query, 1626 a.a., putative PAS/PAC sensor protein (RefSeq) from Shewanella sp. ANA-3

Subject, 1686 a.a., putative PAS/PAC sensor protein (RefSeq) from Shewanella sp. ANA-3

 Score =  317 bits (812), Expect = 7e-90
 Identities = 230/647 (35%), Positives = 343/647 (53%), Gaps = 32/647 (4%)

Query: 874  IDITAQRQLEKTLRNAKQEADTANAAKSAFLANMSHEIRTPMNAVLGMLQLMQYTALSVQ 933
            +DIT  + ++  L  AK  A+ AN AKS FLANMSHEIRTPMNA+LGM  L+  T LS +
Sbjct: 937  LDITDTKSIQDELAIAKDAAEAANRAKSDFLANMSHEIRTPMNAILGMSYLVLQTELSSK 996

Query: 934  QQGYVTKAQTAAKSLLGLLNDILDFSKIDAGKLKLDLHPCSIELLMRDLAVVLSANHGNS 993
            Q+ YV K   AA SLLG+LNDILDFSKI+A K+ ++     ++ ++ +LA V+S      
Sbjct: 997  QRDYVGKVHQAAGSLLGILNDILDFSKIEAEKMDIECAVFDLDDVLSNLANVVSYKVEEK 1056

Query: 994  DVEVMFDLDSALPAWLLADQLRLQQILINLAGNALKFTPHGQVIVGLEC-LRHEAESVTV 1052
            ++  +FDL   LP +   D LRL QILIN   NA+KF+ H    V L C  +   E V +
Sbjct: 1057 NMAFIFDLPPELPRYYHGDGLRLGQILINYCNNAVKFS-HNDSNVVLSCESKVHGEQVEL 1115

Query: 1053 QFSIVDSGIGISEEQIERIFTGFEQAESSTSRRFGGTGLGLAISKRLVELMGGQLQVTSK 1112
             F + D GIGI E++   +F  FEQ ++STSR +GGTGLGLAI KRL  LMGG++   S+
Sbjct: 1116 TFCVEDFGIGIPEQKQGVLFGSFEQVDASTSREYGGTGLGLAICKRLAHLMGGEVWCESE 1175

Query: 1113 VGVGSRFWFDLTFPVMEV-EANPRAD-LSGYRILVVDDNQITTEILSKILSDYGCVVETA 1170
            +GVGSRF+  LT    +  + N   D L+G    ++  +    ++L+         VE+A
Sbjct: 1176 LGVGSRFYVRLTLDCADTYDPNALFDPLAGETAKLIGLHPRLDKLLTIHGVSANMQVESA 1235

Query: 1171 SGGYQAIEKVKQATANAQQFDVVLMDWRMPDIDGLQTAEMLKNAGTGSYTPLVVMLTAYG 1230
              G   I ++KQ++       +++ D+           E+L+       + ++++     
Sbjct: 1236 DVG-TVIAQLKQSSTR----QLLICDY------SAFVPELLEALAVNQASRMLLIGQLSD 1284

Query: 1231 HEVIAESQHINNVPFVNFLTKPVTSQILAEAVLNAIEGKTMDANPKPRSQRL------LA 1284
             + +   Q I N   V   TKP+T   +  A+L+ +  ++ D     +   L      LA
Sbjct: 1285 QDSL--RQLIENNDRVISQTKPLTPIAIGNALLSLLGHQSEDGRQVQQDHSLHALKTQLA 1342

Query: 1285 GLTLLVVEDNQLNREVIDELLTYEGATVVLAEGGIEGVTQVLDSGDMFDAVIMDMQMPDI 1344
            G  +L+VEDNQLN+E+  ELL   G  V +A  G+E + +V      FD V+MD QMP +
Sbjct: 1343 GAEVLLVEDNQLNQELAVELLRQAGINVTVANHGLEAIERV--EQQYFDCVLMDCQMPVL 1400

Query: 1345 DGLEATRRIRADGRFDQLPILAMTANASQADKQECLEAGMNAHVSKPIDMQQLLPNILRL 1404
            DG EATRRIR   +F  LPILAMTANA   D ++ L  GMN  ++KP+ ++ L   + R 
Sbjct: 1401 DGYEATRRIRELPQFANLPILAMTANAMSGDIEKALAVGMNDQITKPVHVKDLYTVMARW 1460

Query: 1405 V---GRDAAQFAEPESMHLDAQHNLEGETLLDDIRLILRRFGGNQVFFEKMASSFAPEMI 1461
            +    R +       S H      LEG ++ +     L     N+  +  +   F     
Sbjct: 1461 ITPKQRKSVPLVLKRSTHAQDLPQLEGLSIQNG----LSHCDHNESLYSHLLGLFINTSK 1516

Query: 1462 KQLSLFKQSTKTFDYATTAAISHAIKGIASNFGARRLAVHAAFLEKQ 1508
              L   +++ +  +        H +KG+A+N GA  ++  A+ LE Q
Sbjct: 1517 TLLGQQQRAWQEENADELRLSLHTLKGVAANVGAMEISRLASELELQ 1563