Pairwise Alignments

Query, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 629 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  210 bits (534), Expect = 1e-58
 Identities = 125/356 (35%), Positives = 202/356 (56%), Gaps = 4/356 (1%)

Query: 174 TEALLLGLILVAIVASLLSALFMSRRLVNIVHQIKRVVEHLADG--DLTQKTQISGQNEL 231
           T A++  LI V I+ +LL  L   R L+  +H + R ++ +ADG  DLT++  I   +E 
Sbjct: 276 TSAVIATLIAVVIIIALLGMLI--RILLQPLHVMTRAMQDIADGEGDLTRRLTIQNHDEF 333

Query: 232 CALGADLDRVIDHLRHMISDIAQASEHMSDQIGQLNVQSNANTHALQTHAVETDQVVTAM 291
             LG   +R ++ +   I +++ A+E +++   ++   SN++       A  T  V  A+
Sbjct: 334 GTLGNAFNRFVERIHTSIREVSSATEQVNEVALRVVSASNSSMVNSDEQANRTSSVAAAI 393

Query: 292 TEMSATAHNVAGDAASAARFTQQANEQADKSKKAVEQAANTVVALVGKVDTAAHTIAEMN 351
            E+ A A  +A +AA A+     A   A+  +  VE+    +  L   +  ++  I  +N
Sbjct: 394 NELGAAAQEIARNAAQASHQASDARHLAEDGQHVVERNIQAMNQLSAMISASSSNIEALN 453

Query: 352 ENTRHIATILDVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTA 411
             T +I  IL+VI  I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ S  
Sbjct: 454 SKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQ 513

Query: 412 EINQMLERLRTGANSAVNAMDETKQSCQDAADTTTLVTESLETLTTYVFDINGLSNQIAT 471
           ++ +M+E L+ GA  +V+ M E+++   D+ D   L  E L ++T  + +I+G++  +AT
Sbjct: 514 QVQKMIEELQVGARESVSTMSESQRHSLDSVDIANLAGERLNSVTQRIGEIDGMNQSVAT 573

Query: 472 AAEEQSAVSEEINRNLNTIREMVEELNQSGKATLNSATSLAATKEQLTGVVSHFRL 527
           A EEQ++V E IN ++  I  + +E  ++ ++TL +   L     +L  +V  FR+
Sbjct: 574 ATEEQTSVVESINMDITEINTLNQEGVENLQSTLRACADLEQQAARLKQLVGSFRI 629