Pairwise Alignments

Query, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 541 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  240 bits (613), Expect = 8e-68
 Identities = 169/529 (31%), Positives = 284/529 (53%), Gaps = 27/529 (5%)

Query: 19  SILLIIIGISSYRGFAELNNTS----SRLVNNTKLAETFTNVREAFFELRLATL---VHN 71
           ++L+ ++G  +    A +  ++    S LV   +L     ++RE    +R  +L   +  
Sbjct: 20  ALLVALLGFFALSNMASIRASAVQVESGLVPKMRLV---ADIREIMLRIRTISLRMALDP 76

Query: 72  SDAISLQQRNV-----RQLVEQLAEFNTDFMGQDARTIRTLLPQIEQYVRLYQQELAFA- 125
           + A   Q R+      + L ++LAE +      D   +R+L  Q +  +RLYQQ LA + 
Sbjct: 77  NPASLAQYRSQMDTRSQDLTKRLAELDAVI---DTPEVRSLYDQFQVSLRLYQQGLAQSF 133

Query: 126 ----KQTGTEPE--LTSERGALGPKVSNEINQLVKLITQRNHELGKQAEDKVNATEALLL 179
               KQ G E    L  +   +      ++N L      + ++ G++AE + + +  +++
Sbjct: 134 VLADKQQGAELNKLLLVDMKTVVDGSGAQLNALADYYNAQVNQQGQEAESQYSRSRTMVV 193

Query: 180 GLILVAIVASLLSALFMSRRLVNIVHQIKRVVEHLADGDLTQKTQISGQNELCALGADLD 239
           G +L+A ++++  A  ++R +V  +    R  E++A GDLTQ   ++G +E+  L   L 
Sbjct: 194 GFVLLAALSTVALAWLLTRSIVGPLSHAVRAAENVAHGDLTQTVDVTGDDEVTRLLVALK 253

Query: 240 RVIDHLRHMISDIAQASEHMSDQIGQLNVQSNANTHALQTHAVETDQVVTAMTEMSATAH 299
            +  +LR  +  I Q++  M+     LN  ++ ++ +LQ    E +Q  TA+ EM++ A 
Sbjct: 254 TMQSNLRGTLQLIRQSAGQMASSATDLNGITDQSSRSLQKQTAEIEQAATAVNEMTSAAD 313

Query: 300 NVAGDAASAARFTQQANEQADKSKKAVEQAANTVVALVGKVDTAAHTIAEMNENTRHIAT 359
            VA +A S +  T+ +NE A + +  V +  N + AL   +   +  +  + E +R I  
Sbjct: 314 EVARNAVSTSESTRLSNETAREGQHRVGETVNAIQALSSNIGETSTLVQNLAEQSRDIGK 373

Query: 360 ILDVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTAEINQMLER 419
           +LDVI  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVRALA RTQ ST EI+QM+  
Sbjct: 374 VLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQSTLEIDQMVTA 433

Query: 420 LRTGANSAVNAMDETKQSCQDAADTTTLVTESLETLTTYVFDINGLSNQIATAAEEQSAV 479
           +RTG++ A+ +M  + Q   D          +L  +T  +  I+  +  IA+AAEEQ+ V
Sbjct: 434 MRTGSDHALTSMQSSTQRATDTLALAEGAGGALSQITDSIDQIHQRNLVIASAAEEQAQV 493

Query: 480 SEEINRNLNTIREMVEELNQSGKATLN-SATSLAATKEQLTGVVSHFRL 527
           ++E++RN+  IR++  + + SG   +N S+  LA     L   V+ F+L
Sbjct: 494 AKEVDRNIVNIRDLSAQ-SSSGAGQINGSSRELAQLAVALNEAVARFQL 541