Pairwise Alignments

Query, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 540 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  213 bits (543), Expect = 1e-59
 Identities = 155/543 (28%), Positives = 271/543 (49%), Gaps = 25/543 (4%)

Query: 6   KTSTLTALPSVFASILLIIIGISSYRGFAELNNT-----SSRLVNNTKLAETFTNV---R 57
           K ST   L  +  +++ + +G+   +G   L        S+ LV+ +  A T   +    
Sbjct: 2   KISTKLLLSFLLCALVTLGVGLLGIKGVVRLATALELTFSNNLVSVSNTAATLNGLVAHN 61

Query: 58  EAFFELRLATLVHNSDAISLQQRN-VRQLVEQ--------LAEFNTDFMGQDARTIRTLL 108
              + L  A+       +S Q R  VRQ + Q         A +    +  D R     L
Sbjct: 62  RGLYRLMDAS----KGEVSAQDRERVRQDIAQELKRSQAAYATYRATPLEDDERAAGDKL 117

Query: 109 PQIEQYVRLYQQELAFAKQTGTEPELTSERGALGPKVSNEINQLVKLITQRNHELGKQ-- 166
            QI        + +          E  ++      +V  +  +L++++ + N+   K+  
Sbjct: 118 DQILPTYISSSERIMSLLDGNQVDEARTQLNTTNNEVFRQARELIRVMIESNNRQIKEGA 177

Query: 167 --AEDKVNATEALLLGLILVAIVASLLSALFMSRRLVNIVHQIKRVVEHLADGDLTQKTQ 224
             A++  N+    ++  I++A + +L   + ++R +   + Q  +  + +A GDLTQ   
Sbjct: 178 VAADELRNSALTWMISGIVLAFIIALTVGVLITRLITRPIAQAVQSAQRIAKGDLTQAIT 237

Query: 225 ISGQNELCALGADLDRVIDHLRHMISDIAQASEHMSDQIGQLNVQSNANTHALQTHAVET 284
               +E   L   L  +   L+  + +IA AS+ ++    +L+  ++ ++  L     E 
Sbjct: 238 TERTDEAGQLLVALSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEI 297

Query: 285 DQVVTAMTEMSATAHNVAGDAASAARFTQQANEQADKSKKAVEQAANTVVALVGKVDTAA 344
            Q  TA+ +M+A    VA +A S +  ++QA  +A+  ++ VEQA + + ++V +++ + 
Sbjct: 298 QQAATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDST 357

Query: 345 HTIAEMNENTRHIATILDVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAA 404
            ++A++    R I  ++DVI  IADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 
Sbjct: 358 QSVADLAGQVREIGKVIDVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAH 417

Query: 405 RTQASTAEINQMLERLRTGANSAVNAMDETKQSCQDAADTTTLVTESLETLTTYVFDING 464
           RTQ ST +I +M+  ++TGA+ AV AM+++     +         E+L+ +T  V  IN 
Sbjct: 418 RTQTSTVDIEKMIGEVQTGADGAVAAMNKSLNWANNTQTLAQNAGEALQRITASVAKINE 477

Query: 465 LSNQIATAAEEQSAVSEEINRNLNTIREMVEELNQSGKATLNSATSLAATKEQLTGVVSH 524
            +  IA+A+EEQ+ V+ E++RNL  I+++  +       T  S+  L+        +VS 
Sbjct: 478 RNLVIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTSASSQDLSRLATSFNVLVSK 537

Query: 525 FRL 527
           F+L
Sbjct: 538 FQL 540