Pairwise Alignments

Query, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 541 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  226 bits (575), Expect = 2e-63
 Identities = 153/527 (29%), Positives = 269/527 (51%), Gaps = 19/527 (3%)

Query: 17  FASILLIIIGISSYRGFAELNNTSSRLVNNTKLAETFTNVREAFFELRLATLVHNSDAIS 76
           F   L++++GI +    +++   +  +   T  +       + F +L L   V +   ++
Sbjct: 18  FIGALMLLLGIFALNQMSKIRGATQDI---TLSSVPSIRALDDFTQLTLRLRVLSYRLLT 74

Query: 77  LQQRNVRQLVEQLAEFNTDFMGQDARTIRTLLPQIEQ------YVRL---YQQELAFAKQ 127
            ++ +V+Q   +  E     +     T   L+   E+      Y RL   YQQ  A  K 
Sbjct: 75  NREPDVQQKTLEAFELRNQQIRAAQGTYEKLIDSSEERSIYDEYTRLLAQYQQIEARMKS 134

Query: 128 TGTEPELTSERGALGPKV---SNEINQLVKLITQRNHELG----KQAEDKVNATEALLLG 180
                ++   R  L  ++   S ++N ++  +   N++      +QAED+ N     ++G
Sbjct: 135 LSRANQVEELRTLLNTELLSNSEQVNTVLNRLLDYNNKAALATNQQAEDQYNMAFDWVIG 194

Query: 181 LILVAIVASLLSALFMSRRLVNIVHQIKRVVEHLADGDLTQKTQISGQNELCALGADLDR 240
           L+++A   ++L A  ++R +   +       E +A+G+LT+  ++ G +E   L A + +
Sbjct: 195 LLIIATALTMLFAWLLTRSITLPISLALEAAEEVAEGNLTRPIKVDGNDEAGRLLAAMAK 254

Query: 241 VIDHLRHMISDIAQASEHMSDQIGQLNVQSNANTHALQTHAVETDQVVTAMTEMSATAHN 300
           + D LR  +  IA ++  ++    +LN  ++ +   L     E +Q  TA+ EM++    
Sbjct: 255 MQDKLRDTLQRIAGSASQLASAAEELNAVTDESARGLTQQNNEIEQAATAVNEMTSAVEE 314

Query: 301 VAGDAASAARFTQQANEQADKSKKAVEQAANTVVALVGKVDTAAHTIAEMNENTRHIATI 360
           VA +A S +  ++ A   A   +  V++  + +  + G V   A  I ++   +R I  +
Sbjct: 315 VARNAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGDVQATATLIGDLANESRDIGKV 374

Query: 361 LDVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTAEINQMLERL 420
           LDVI  +ADQTNLLALNAAIEAARAGE GRGFAVVADEVRALA RTQ ST+EI +M+  +
Sbjct: 375 LDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSI 434

Query: 421 RTGANSAVNAMDETKQSCQDAADTTTLVTESLETLTTYVFDINGLSNQIATAAEEQSAVS 480
           + G   AV++M  + +  +   +       SL+T+ T + +IN  +  IA+AAEEQ+ V+
Sbjct: 435 QAGTEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAIVEINERNLVIASAAEEQAQVA 494

Query: 481 EEINRNLNTIREMVEELNQSGKATLNSATSLAATKEQLTGVVSHFRL 527
            E++RNL  IR++  +       T  +++ L+     L G+V  F+L
Sbjct: 495 REVDRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLNGLVGRFQL 541