Pairwise Alignments

Query, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 638 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  227 bits (578), Expect = 1e-63
 Identities = 148/455 (32%), Positives = 240/455 (52%), Gaps = 17/455 (3%)

Query: 73  DAISLQQRNVRQLVEQLAEFNTDFMGQDARTIRTLLPQIEQYVRLYQQELAFAKQTGTEP 132
           DAI    + +  L  Q+ E  +  + Q + +++     + QY        A  K  G + 
Sbjct: 201 DAIDNALKKIASLTGQIPEQYSTNLQQASVSLQAYRAAVSQYRDSQVASAAALKIMGVQG 260

Query: 133 ELTSERGALGPKVSNEINQLVKLITQRNHELGKQAEDKVNATEALLLGLILVAIVASLLS 192
           ++  +R       SN++     ++            D  NA + LLL  +L A++  L++
Sbjct: 261 DILLDR-------SNKLTTSQTVVRDA---------DAANAKQLLLLATVL-ALIFGLVA 303

Query: 193 ALFMSRRLVNIVHQIKRVVEHLADGDLTQKTQISGQNELCALGADLDRVIDHLRHMISDI 252
           A  ++R+++  ++Q  +V E +A GDL+       Q+EL  L   +  +   LR +I  I
Sbjct: 304 AWAITRQIIIPLNQTLQVAERVASGDLSHNLTSLRQDELGQLQRAMQSMTVGLRELIGGI 363

Query: 253 AQASEHMSDQIGQLNVQSNANTHALQTHAVETDQVVTAMTEMSATAHNVAGDAASAARFT 312
           +     ++    QL+  +   +  + +  VETDQV TAM EM+AT   VA +A  A+   
Sbjct: 364 SDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEVARNAEEASEAA 423

Query: 313 QQANEQADKSKKAVEQAANTVVALVGKVDTAAHTIAEMNENTRHIATILDVIGDIADQTN 372
             A++QA +  K V +A   +  L  +V  +   + ++   +  I ++LDVI  +A QTN
Sbjct: 424 VAADQQAREGDKVVGEAIAQIERLATEVGNSTAAMGDLKRESDKIGSVLDVIKSVAQQTN 483

Query: 373 LLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTAEINQMLERLRTGANSAVNAMD 432
           LLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ ST EI +++  L+ G     + MD
Sbjct: 484 LLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIVGLQNGTQQVASIMD 543

Query: 433 ETKQSCQDAADTTTLVTESLETLTTYVFDINGLSNQIATAAEEQSAVSEEINRNLNTIRE 492
            ++     + + T     +L  +T  V  I  +++QIATAAE+QSAV+EEINR++  +R+
Sbjct: 544 NSRGLTDSSVELTRRAGSALANITRTVSTIQAMNSQIATAAEQQSAVAEEINRSVLNVRD 603

Query: 493 MVEELNQSGKATLNSATSLAATKEQLTGVVSHFRL 527
           + E+ + + + T  S+  LA     L  +V  FR+
Sbjct: 604 VSEQTSSASEETAASSAELARLGIYLQTLVGRFRI 638