Pairwise Alignments

Query, 439 a.a., putrescine transporter (RefSeq) from Shewanella sp. ANA-3

Subject, 444 a.a., putative cadaverine/lysine antiporter from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  218 bits (554), Expect = 4e-61
 Identities = 131/407 (32%), Positives = 217/407 (53%), Gaps = 16/407 (3%)

Query: 4   SANKIGVVQLTIITIVNMMGSGIIMLPTQLAQVGTISILSWLVTAAGSTALAYAFAKCGM 63
           SA KIG+   T +   NMMGSGI +LP  LA +G I+I  W+++  G+ +LAY +A+   
Sbjct: 3   SAKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWIISIIGAMSLAYVYARLAT 62

Query: 64  FSKKSGGMGGYA---EYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYAAVLLEVNLSP 120
            + + GG   YA     AFG    F     Y  +  I N+AI I+AV Y +    V   P
Sbjct: 63  KNPQQGGPIAYAGEISPAFG----FQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDP 118

Query: 121 MAICLATIGVLWLATVANFGGARITGRVSSVTVWGIILPVIGVSLIGWFWFDIDLYKGAW 180
           +   +A I ++W+ T  N  G     R++++ +  +++PV+  +++GW WFD   Y   W
Sbjct: 119 VPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFDAATYAANW 178

Query: 181 NPHDMPFFKALGGSIAMTLWAFLGLESACANSETVDNPEKNVPIAVMGGTLGAALIYIVS 240
           N  D     A+  SI + LWAF+G+ESA  ++  V NP++ VP+A M GT  A ++YI +
Sbjct: 179 NTADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVYIAA 238

Query: 241 TNVIAGIVPNADLANSNAPFGLAFAQMFNPVVGKIVMACAIISCTGSLLGWQFTIAQVFK 300
           T V++G+ P++ +A S APF ++ + +       +V A    +C  SL  W   + Q   
Sbjct: 239 TQVLSGMYPSSVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGV 298

Query: 301 ASADEGFFPKVFSKVSKADAPIWGMTI-IVSIQTLLSLMTISPS----LSKQFEALVNLA 355
            +A++G FPKV+ +V     P  G+ +  V +  L+ L+T+  S     S  F  L  +A
Sbjct: 299 RAANDGNFPKVYGEVDSNGIPKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIA 358

Query: 356 VVTNIVPYILSMAALGVMQKQLKVPANKARVANVIAVIGALYSFYAL 402
           V+  ++PY  S   L +  + + +   +  V+ + +V+G ++ F AL
Sbjct: 359 VLLTMLPYFYSCVDL-IRFEGVNI---RNFVSLICSVLGCVFCFIAL 401