Pairwise Alignments

Query, 439 a.a., putrescine transporter (RefSeq) from Shewanella sp. ANA-3

Subject, 438 a.a., basic amino acid/polyamine antiporter (APA) family transporter from Caulobacter crescentus NA1000 Δfur

 Score =  212 bits (539), Expect = 2e-59
 Identities = 135/423 (31%), Positives = 221/423 (52%), Gaps = 12/423 (2%)

Query: 8   IGVVQLTIITIVNMMGSGIIMLPTQLAQVGTISILSWLVTAAGSTALAYAFAKCGMFSKK 67
           +GV     + + NM+GSG+ MLP  LA  G  ++++W++T  GS  LAY FAK      +
Sbjct: 14  LGVWMCAALVVGNMIGSGVFMLPASLAPYGWNAVIAWILTIGGSLCLAYVFAKLAGAFPR 73

Query: 68  SGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYAAVLLEVNLS-PMAICLA 126
           +GG   Y E AFGR+  F+  ++Y +S+ +AN AIAI+A+ Y +V L V    P    L 
Sbjct: 74  AGGPFAYTEEAFGRAPGFLVAWSYWISVWVANAAIAIAAISYLSVFLPVIAKVPALPALL 133

Query: 127 TIGVLWLATVANFGGARITGRVSSVTVWGIILPVIGVSLIGWFWFDIDLYKG--AWNPHD 184
           T+ V+W AT  N  GAR  G    VT    ++P+I V+ +      + L KG  A  P +
Sbjct: 134 TVAVVWTATAINCAGARSAGWTQVVTTVLKLVPLIAVAGLA---VSVLLRKGPAAITPFE 190

Query: 185 MPFFK--ALGGSIAMTLWAFLGLESACANSETVDNPEKNVPIAVMGGTLGAALIYIVSTN 242
                  ++  + A+TLWA LG+E+A   ++ V +P + +P A + GT  A L+Y+V ++
Sbjct: 191 PSALSGASITAAAALTLWALLGVETATIPADKVKDPARTIPRATLAGTAFAGLVYLVVSS 250

Query: 243 VIAGIVPNADLANSNAPFGLAFAQMFNPVVGKIVMAC-AIISCTGSLLGWQFTIAQVFKA 301
            +  + P A L  SNAPF + F         ++ +A  A IS  G+L GW     ++  A
Sbjct: 251 GVLLLTPTAVLQGSNAPF-VDFVSYHGGGDFRLALAAFATISALGALNGWSLIQGELPAA 309

Query: 302 SADEGFFPKVFSKVSKADAPIWGMTIIVSIQTLLSLMTISPSLSKQFEALVNLAVVTNIV 361
            A EG FP  F+K S    P+    +   + T+L LM  + S++  F  +  L+  + + 
Sbjct: 310 MAREGVFPAWFAKTSANGTPVRAHLVSSVLVTILVLMNYAKSMADAFTFMALLSTTSTLF 369

Query: 362 PYILSMAALGVMQKQLKVPANKARVANVIAVIGALYSFYALYSSGETAVMLGAIATFFGW 421
            Y+    +L V++ Q +   ++++   ++A +GALYS +    +G +  + G +    G 
Sbjct: 370 AYL--FCSLAVLRLQGQGRMDRSKALTLVAALGALYSVWTFSGAGWSVTLWGLVLLAVGA 427

Query: 422 TIY 424
            IY
Sbjct: 428 PIY 430