Pairwise Alignments

Query, 554 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  196 bits (499), Expect = 2e-54
 Identities = 157/601 (26%), Positives = 263/601 (43%), Gaps = 74/601 (12%)

Query: 10  EMLAHWANTRGDEIYLRQPIKGQYLDFTWNEVQEKVQQLAGALRHLGLEPGDKIAVLSKN 69
           + L HWA  R D + LRQ   G +   +W+   ++ +     L  LGL PG  +AVLS+N
Sbjct: 20  QQLLHWAARRPDAVALRQKEYGVWQPISWSAYAQQARWFGLGLLRLGLRPGQAVAVLSEN 79

Query: 70  CAEWFITDL--ALMHGGYISVPIYPTANTDTIRYVLQHSGAKAIFLGKLDHWADQEAGVG 127
             EW    L  AL+ G  ++  +YPT+  + I ++L  S A  I     +   D+   + 
Sbjct: 80  RKEWVFAQLGAALVRG--VTAGVYPTSPAEEIEHLLALSDAPVIVCEDQEQ-LDKVLSIR 136

Query: 128 GELLRL---------AMPYETMPAQYQWEQLLKMGN------PLIEAPL---PELDQTMT 169
             L  L          +          +++++ +G       P   A     P LD    
Sbjct: 137 DRLPHLHTIVLIDSRGLRRYDRTGMIDFDEVVALGRRFEADEPAAAAAATVGPALDDIGL 196

Query: 170 LIYTSGSTGQPKGAIQTFASYGWTCQAVVRDLRTNGNDRLLSYLPLAHITERVAIEGSSF 229
           +++TSGSTG+PK A+ ++   G   + +   L     D L+SYLPL H+ E++       
Sbjct: 197 IVFTSGSTGRPKAAMMSWRGLGTAARGLNSVLGCREGDSLVSYLPLCHMGEQMFSLHIPV 256

Query: 230 YSGSTVAFVESLDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKIG-VGKLNLLLKIPLI 288
             G+ V F ESL +   D++   P +FF VPR+W  F   I +K+   G L L L    +
Sbjct: 257 AFGAVVNFAESLRTVQDDLRELSPRIFFGVPRIWEKFHAAIQNKLREAGGLRLWLYERAM 316

Query: 289 SSL-------------------------VKHKIHKGLGLNHCRLLGSGSAPIPPSLIHWY 323
            SL                         +   +   LGL  CR+  S +API P ++ ++
Sbjct: 317 RSLAHDAGVPRAQWSWLQRARWAVWYVLILRSLLNYLGLRGCRVAVSAAAPIAPEVLRFF 376

Query: 324 HSIGLDICEAWGMTENCAYSIINYPFDVRKIGTVGKPVQDCQIRQGEDGELLLKSPGLMT 383
             +G+ I EA+GMTE    + +  P D   +GTVG P    +++  +DGE+L++   +  
Sbjct: 377 RVLGVPIREAYGMTEASGATTMQ-PGDDSPVGTVGVPYPGVEVQLADDGEILIRGEVVFR 435

Query: 384 AYYLQPEATAAAFDPDGFFHTGDLCAID--------ADGCVTITGRVKDNFKTAKGKYVA 435
            Y    EAT  A D +G+ HTGD+   +        A   + I  R KD   TA GK + 
Sbjct: 436 GYLKNDEATREAIDAEGWLHTGDIGRWEDSPSKNAPAGRELRIVDRKKDIMITAGGKNIT 495

Query: 436 PVPIERKLAQDPHVELICVIGSGLPHPVALVQLSEGATLQAREE---------------- 479
           P  IE  +   P ++    I        AL+Q+      +  EE                
Sbjct: 496 PSEIENAMRFSPFIKEAVAIADRRHFVSALIQIDFETVSKWSEEKGLVYTTFRSLVELPQ 555

Query: 480 VRTSLKATLDSVNPHLESHEHVDAIVVVNEPWTIENDVLTPTLKIKRHVLEKAFSERVDG 539
           VR  ++  +D+ N  +   + V    ++ +    ++  +T T+K++R  + + +++ ++ 
Sbjct: 556 VRELVQREVDTANARMPQVQQVRKFHLLTKELDHDDGEVTATMKVRRKAVFEKYAQVIEE 615

Query: 540 I 540
           I
Sbjct: 616 I 616