Pairwise Alignments

Query, 554 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 640 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  180 bits (457), Expect = 1e-49
 Identities = 152/618 (24%), Positives = 273/618 (44%), Gaps = 82/618 (13%)

Query: 11  MLAHWANTRGDEIYLRQPIKGQYLDFTWNEVQEKVQQLAGALRHLGLEPGDKIAVLSKNC 70
           MLAH A  R +   +R+   G +  +TWN V ++V+++A  L  LG +  D +A++  N 
Sbjct: 1   MLAH-AEARPESPAVREKDLGIWQTWTWNAVAQEVREMACGLASLGFKAFDNLAIVGANR 59

Query: 71  AEWFITDLALMHGGYISVPIYPTANTDTIRYVLQHSGAKAIFL------GKLDHWADQEA 124
              ++  +A      + VP+Y  A    + ++LQ +G + + +       KL    D + 
Sbjct: 60  PHLYMAVIAAQSLRGVPVPLYQDAVAGEMVFMLQDAGIEFVIVEDQEQVDKLLECRDIQQ 119

Query: 125 GVGGELLRL------AMPYETMPAQYQWEQLLKMGNPLIEAPLPELDQTMT--------- 169
           G    +  +       + +   P    +EQL  +G    +A     D+ +          
Sbjct: 120 GKLPAIRHVIYDDPKGLRHYDQPGLMSYEQLRALGREFDKANPGYYDRAVASGEATDVGV 179

Query: 170 LIYTSGSTGQPKGAIQTFASYGWTCQAVVRDLRTNGNDRLLSYLPLAHITERVAIEGSSF 229
           ++YTSG+TG+PKG  QT AS+    +  V   R    D ++SYLP+A + + +       
Sbjct: 180 ILYTSGTTGRPKGVCQTHASFIAAGRGGVETDRLGPGDNIMSYLPMAWVGDHLFSVAQWL 239

Query: 230 YSGSTVAFVESLDSFVADVQRAKPTVFFSVPRLWS-------------------LFQK-- 268
             G T+   ES ++ + D++   P+ +F  PR +                    L+ K  
Sbjct: 240 VGGFTLNCPESSETVMNDMREIGPSYYFGPPRTFEGLLTAVSIRMEDAAAPKRWLYAKFM 299

Query: 269 --------NIIDKIGVGKLNLLLKIPLISSLVKHKIHKGLGLNHCRLLGSGSAPIPPSLI 320
                   +I++   VG  +  L   L + L+   +   LG++  R+  +  A I P L 
Sbjct: 300 ALARRVGADILNGAPVGMGDRAL-YALGNLLIYGPLRNVLGMSRIRVAYTAGAAIGPDLF 358

Query: 321 HWYHSIGLDICEAWGMTENCAYSIINYPFDVRKIGTVGKPVQDCQIRQGEDGELLLKSPG 380
            +Y SIG+++ + +G TE CAY  +     V K+ TVG      +++   DGE+L++   
Sbjct: 359 RFYRSIGVNLKQFYGQTETCAYVCLQQDGKV-KLQTVGTAAPGIELKIAADGEVLVRGVS 417

Query: 381 LMTAYYLQPEATAAAFDPDGFFHTGDLCAIDADGCVTITGRVKDNFKTAKGKYVAPVPIE 440
           ++  YY +P+ATA   D +G+FHTGD   +D++G + I  R KD  +   G   AP  IE
Sbjct: 418 VLKEYYKRPDATAEVLDANGYFHTGDAGVLDSEGHLRIIDRAKDVGRLVGGAIFAPNYIE 477

Query: 441 RKLAQDPHVELICVIGSGLPHPVALVQLSEGAT----------------LQAREEVRTSL 484
            KL   P ++     G+      A + +   A                 L  + +V   +
Sbjct: 478 NKLKFFPQIKEAVCFGNARDEVCAAINIDFEAVGNWAERRGLAYGGYVDLAGKPDVLALV 537

Query: 485 KATLDSVNPHLESHE-----HVDAIVVVNEPWTIENDVLTPTLKIKRHVLEKAFSERVDG 539
              +  VN  L + +      +   +V+++    ++D LT T K++R  + + ++  VD 
Sbjct: 538 AECIGKVNADLATEDGMGETQIARFLVLHKELDPDDDELTRTRKVRRGFIAEKYAVLVDA 597

Query: 540 IRG--------AQVRWED 549
           + G         QV++ED
Sbjct: 598 LYGGKAEQFIETQVKFED 615