Pairwise Alignments

Query, 554 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 630 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  172 bits (436), Expect = 3e-47
 Identities = 149/606 (24%), Positives = 277/606 (45%), Gaps = 77/606 (12%)

Query: 7   TPVEMLAHWANTRGDEIYLRQPIKGQYLDFTWNEVQEKVQQLAGALRHLGLEPGDKIAVL 66
           T + +LA  A   G+ + +R+   G + + TW+++ +     A  +  LG    D + VL
Sbjct: 6   TLIHILARNAELLGNRVAMREKHLGIWQETTWSQMLDTTLAYAAGMESLGFSAEDALLVL 65

Query: 67  SKNCAEWFITDLAL-MHGGYISVPIYPTANTDTIRYVLQHSGAKAIF------LGKLDHW 119
             N    ++  LA  + GGY ++P+Y TA  D IR+ +  +  + +       + K+   
Sbjct: 66  GDNRPRLYMGMLAAGVLGGY-AMPVYSTATPDEIRHFMHETHVRFVLAEDQEQVDKVLDL 124

Query: 120 ADQEAGVGGELLR--LAMPYETMPAQYQWEQLLKMG-----------NPLIEAPLPELDQ 166
            DQ A +   +      +   + P    WE+L  +G           N LIE  LP  D 
Sbjct: 125 GDQGATIKNIIYDEPRGLTNYSNPGLISWEKLQAIGADRLRAEPKLRNALIERALP--DG 182

Query: 167 TMTLIYTSGSTGQPKGAIQTFASYGWTCQAVVRDLRTNG----NDRLLSYLPLAHITERV 222
               +++SG+TG+PKG + +  ++     A VR+    G     + +L+YLP+A + +  
Sbjct: 183 PAVFVHSSGTTGKPKGVVLSHRNF----LAGVRNAHRGGAFTFGETILAYLPMAWVGDFA 238

Query: 223 AIEGSSFYSGSTVAFVESLDSFVADVQRAKPTVFFSVPRLW----SLFQKNIIDKIGVGK 278
              G+      T+   E  ++ + D++   PT + + PR W    +  Q  + D   + K
Sbjct: 239 ITVGAGVALHFTINIPERQETVLHDLREVAPTFYLAAPRSWDNMLTTIQVRMEDSTPLKK 298

Query: 279 ------LNLLL---------KIPLISS---------LVKHKIHKGLGLNHCRLLGSGSAP 314
                 +N  L         K P ++          L+   I   LGL   R   +G   
Sbjct: 299 WLYDVFMNSALASERRKLEGKQPSLTERLMRQLGEWLIFGPIKDQLGLTRLRGAFTGGEA 358

Query: 315 IPPSLIHWYHSIGLDICEAWGMTENCAYSIINYPFDVRKIGTVGKPVQDCQIRQGEDGEL 374
           I      +Y ++G+ + + +G TE+ A++ +    +VR + TVGKP+   +++ G++GE+
Sbjct: 359 IGEDTFVFYRALGVKLRQFYGQTESSAFTALQDTEEVR-LHTVGKPLPGVEVKIGDNGEV 417

Query: 375 LLKSPGLMTAYYLQPEATAAAFDPDGFFHTGDLCAIDADGCVTITGRVKDNFKTAKGKYV 434
           L++S  + + YY    AT  A + DG+ +TGD   I+ DG + + GR+ +   T+KG+  
Sbjct: 418 LIRSGSVFSGYYKLENATREALE-DGWLYTGDAGYIEPDGHMVVLGRLSEVVYTSKGERY 476

Query: 435 APVPIERKLAQDPHVELICVIGSGLPHPVALVQLS----------------EGATLQARE 478
            P  IE +L   P+++ + V+GSG     A++ +                   A L  + 
Sbjct: 477 IPNYIENRLKFSPYIKDVAVLGSGRDTLAAIICIDMEPVGHWAEVRGISYMSYADLSQKP 536

Query: 479 EVRTSLKATLDSVNPHLESHEHVDAIVVVNEPWTIENDVLTPTLKIKRHVLEKAFSERVD 538
           EV   + A +  VN  L     +   V +++ +  ++  +T T K++R+V+E+ ++  +D
Sbjct: 537 EVIELVTAAVKRVNSILPDGLKLHHFVSLHKEFDPDDGEVTRTRKLRRNVVEERYAPIID 596

Query: 539 GIRGAQ 544
            I G Q
Sbjct: 597 AIYGGQ 602