Pairwise Alignments

Query, 554 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 622 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  211 bits (537), Expect = 7e-59
 Identities = 157/606 (25%), Positives = 272/606 (44%), Gaps = 76/606 (12%)

Query: 10  EMLAHWANTRGDEIYLRQPIKGQYLDFTWNEVQEKVQQLAGALRHLGLEPGDKIAVLSKN 69
           ++L HWA    D +  R+   G +   TW    E  ++ A  L+ LG + GD++A+ S++
Sbjct: 18  KLLQHWAQRFPDALAFREKDYGIWNRMTWQHYFETARRFALGLKSLGFDKGDRLAIASED 77

Query: 70  CAEWFITDLALMHGGYISVPIYPTANTDTIRYVLQHSGAKAIFLGK-------LDHWADQ 122
             +W  TDLA    G + V IYPT     ++Y++ HS +K +  G        LD  A  
Sbjct: 78  SPQWMFTDLATQAIGGVVVGIYPTNPWPELQYIVHHSNSKFVVCGDQEQVDKVLDAMAKH 137

Query: 123 EAGVGGELLRLAMPYETMPAQ-----YQWEQLLKMGNP--------------LIEAPLPE 163
           + G+   +  + +  + M          +E +L++G+                IE   P 
Sbjct: 138 DTGLPDLVKIICVDMKGMRGYKHDKLMSFEDVLELGDQNAAASPQHASAFDRAIEDTQP- 196

Query: 164 LDQTMTLIYTSGSTGQPKGAIQTFASYGWTCQAVVRDLRTNG-NDRLLSYLPLAHITERV 222
            D T  L+YTSG+TG PKGA+ +  +   T   +    + +  N  ++ YLPL H+ ER 
Sbjct: 197 -DDTCMLVYTSGTTGPPKGAMLSHRNLIVTVDKLKTHFKLDRHNYEVVCYLPLCHVAERA 255

Query: 223 AIEGSSFYSGSTVAFVESLDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKI-------- 274
                   +G  V + ES+D+   +++   PTVF  VPR+W   Q+ I+ ++        
Sbjct: 256 FSTVMHLLTGGVVNYAESIDTVAVNLREIAPTVFLGVPRIWEKLQQGILIRMQDASRFQR 315

Query: 275 ---------------------GVGKLNLLLKIPLISSLVKHKIHKGLGLNHCRLLGSGSA 313
                                G   L+  L   ++  L+   + K +GL+  +    G A
Sbjct: 316 WAFQRCFDAGRRLFEKVEAQGGQRSLSDRLHFFVLWLLMFRNLQKFVGLDRMQCGFCGGA 375

Query: 314 PIPPSLIHWYHSIGLDICEAWGMTENCAYSIINYPFDVRKIGTVGKPVQDCQIRQGEDGE 373
            + P ++ ++  +G+ + + +GMTE+       +   + K+G  G P+     +  EDGE
Sbjct: 376 SVSPEVLKFFRILGIPVYQVYGMTESGGVIFFQHEKAI-KLGATGLPIDGLNWKIAEDGE 434

Query: 374 LLLKSPGLMTAYYLQPEATAAAFDPDGFFHTGDLCAIDADGCVTITGRVKDNFKTAKGKY 433
           L++K P +   Y     ATA     DG+ HTGD+ A+  +G + I  R K    T+ GK 
Sbjct: 435 LVVKHPAVFKGYIHDEGATAKTV-VDGWLHTGDIVALADNGELMIVDRKKAIIITSGGKN 493

Query: 434 VAPVPIERKLAQDPHVELICVIGSGLPHPVALVQL----------------SEGATLQAR 477
           +AP  IE  L    +V    ++G G  +  AL+Q+                +   +L A 
Sbjct: 494 IAPSEIENALKDSLYVREAIILGDGRHYLAALIQVDYETVGKWAQERKLAYTTYKSLAAL 553

Query: 478 EEVRTSLKATLDSVNPHLESHEHVDAIVVVNEPWTIENDVLTPTLKIKRHVLEKAFSERV 537
            EVR  +   +  VN      E++   +++ +    ++  LT T K++R+V+EK F++ +
Sbjct: 554 PEVRELIDEDVKRVNKLFARVENIRKFLILEKELDHDDGELTATQKVRRNVIEKTFAKEI 613

Query: 538 DGIRGA 543
             I GA
Sbjct: 614 AIIYGA 619