Pairwise Alignments

Query, 554 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  255 bits (652), Expect = 3e-72
 Identities = 169/585 (28%), Positives = 285/585 (48%), Gaps = 65/585 (11%)

Query: 19  RGDEIYLRQPIKGQYLDFTWNEVQEKVQQLAGALRHLGLEPGDKIAVLSKNCAEWFITDL 78
           RG  I++RQ   G +  +TW++    V+++A  L  LG E  +  ++LS    EW + DL
Sbjct: 34  RGPAIWMRQKDFGIWRSWTWDQTGTAVREIAHGLMALGFEARETASILSNTTVEWVLCDL 93

Query: 79  ALMHGGYISVPIYPTANTDTIRYVLQHSGAKAIFLGKLDHWADQEAGVGGELLRL----A 134
           A++  G ++  IYPT   + ++Y+   S    +F+   D   D+   V   L RL     
Sbjct: 94  AVLSAGGVANGIYPTDAAEQVQYLCDDSATTVLFVED-DEQLDKALEVRAHLPRLKKIVV 152

Query: 135 MPYETM-----PAQYQWEQLLKMGNP-------LIEAPLPEL--DQTMTLIYTSGSTGQP 180
           +  E +     P       L +MG         L+E  +  +  +    L+YTSG+TG+P
Sbjct: 153 VDMEGLRDLHDPQVISLAALREMGRAHLAQHPGLVEVRVAAVKPEDLAILVYTSGTTGRP 212

Query: 181 KGAIQTFASYGWTCQAVVRDLRTNGNDRLLSYLPLAHITERVAIEGSSFYSGSTVAFVES 240
           KGA+ +     +T +     +  + ND  + +LPL HI ER+  E  S Y+G+ + FVE+
Sbjct: 213 KGAMHSHQGLVYTVRGYNTLIARDENDECMCFLPLCHIAERMGGEYFSLYTGAKLNFVEN 272

Query: 241 LDSFVADVQRAKPTVFFSVPRLWSLFQKNIID---------------KIGVGKL------ 279
            ++   +V+   PTVF +VPR+W  F   ++                 IGVG+       
Sbjct: 273 PETVPENVREIAPTVFTAVPRVWEKFYSGVMIALKEASQLQQAAYAWAIGVGQKVADRVM 332

Query: 280 -------NLLLKIPLISSLVKHKIHKGLGLNHCRLLGSGSAPIPPSLIHWYHSIGLDICE 332
                   L L+  L   LV   + K +G++  R L +G+API P L+ WY ++G+ + E
Sbjct: 333 AGQPVPGGLRLQFRLARLLVLDNVRKLIGIHRARFLVTGAAPISPDLVRWYLALGVPMLE 392

Query: 333 AWGMTENCAYSIINYPFDVRKIGTVGKPVQDCQIR-QGEDGELLLKSPGLMTAYYLQPEA 391
            WGMTE C  S    P    K G++G      ++R   + GE+L++ P +   Y   PE 
Sbjct: 393 VWGMTETCGAS-TGIPAARIKPGSIGPAATYNEVRLDPQTGEILVRGPNVFMGYLNLPEK 451

Query: 392 TAAAFDPDGFFHTGDLCAIDADGCVTITGRVKDNFKTAKGKYVAPVPIERKLAQDPHVEL 451
           TA   D DG+ HTGD+  +D +G   IT R+KD   TA GK + P  +E +L   P+V  
Sbjct: 452 TAETIDTDGWLHTGDVGQVDEEGFFRITDRMKDIIITAGGKNITPSELENELKFSPYVTD 511

Query: 452 ICVIGSGLPHPVALVQL----------------SEGATLQAREEVRTSLKATLDSVNPHL 495
             VIG   P+   ++ +                S  A+L    EV++ ++A +D VN   
Sbjct: 512 AVVIGDKRPYLTVIIMIDQENVEKYAQDNDVPFSNYASLTRSPEVQSLIQAEIDRVNKKF 571

Query: 496 ESHEHVDAIVVVNEPWTIENDVLTPTLKIKRHVLEKAFSERVDGI 540
              E +    +++   + E++ LTPT+K+KR ++++ ++++++ +
Sbjct: 572 ARVEQIKKFFLLDTQLSAEDEELTPTMKLKRKLVQQKYADQIEAM 616