Pairwise Alignments

Query, 554 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 564 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  446 bits (1146), Expect = e-129
 Identities = 235/553 (42%), Positives = 335/553 (60%), Gaps = 14/553 (2%)

Query: 9   VEMLAHWANTRGDEIYLRQPI-KGQYLDFTWNEVQEKVQQLAGALRHLGLEPGDKIAVLS 67
           ++ L HW  T    + L QP+  G   +FTW E+ ++V+++A  L+  G  PG K+A+LS
Sbjct: 11  LQRLYHWEKTDPHRVTLTQPLGSGAVQEFTWAEIADQVRRMATYLQSQGWAPGSKVAILS 70

Query: 68  KNCAEWFITDLALMHGGYISVPIYPTANTDTIRYVLQHSGAKAIFLGKLDHWADQEAGVG 127
           KNCA W ++DLA+   G++SVP+YPT  ++T+R +L HS AKA F+GKLD W   + GV 
Sbjct: 71  KNCAWWMMSDLAIWMAGHVSVPLYPTLASETVRQILTHSEAKACFIGKLDGWEGMKPGVP 130

Query: 128 GELLRLAM---PYETMPAQYQWEQLLKMGNPLIEAPLPELDQTMTLIYTSGSTGQPKGAI 184
             L  ++    P + + A   W+ +     PL   P    D+  TLIYTSG+TG PKG +
Sbjct: 131 AGLPCISYALSPLDAIQAYEGWDAICGRHEPLQGEPTRGADELATLIYTSGTTGMPKGVM 190

Query: 185 QTFASYGWTCQAVVRDLRTNGNDRLLSYLPLAHITERVAIEGSSFYSGSTVAFVESLDSF 244
            +F ++ W   + V+ +  +G DR+LSYLPLAH+ ER+ +E     +G  V F ESL++F
Sbjct: 191 HSFGNFAWAIDSGVKRIPLSGEDRMLSYLPLAHVVERMLVEHGWLRTGMHVYFAESLETF 250

Query: 245 VADVQRAKPTVFFSVPRLWSLFQKNIIDKIGVGKLNLLLKIPLISSLVKHKIHKGLGLNH 304
            AD+QRA+PT+FFSVPRLW  FQ+ I  K+   KL  LL+IP++  +V+ K+ K LGL+ 
Sbjct: 251 TADLQRAQPTIFFSVPRLWVKFQQGIHAKMPPAKLGRLLRIPILGGIVRRKVMKALGLDQ 310

Query: 305 CRLLGSGSAPIPPSLIHWYHSIGLDICEAWGMTENCAYSIINYPFDVRKIGTVGKPVQDC 364
           C+    G+AP+P +L+ WY  +GL+I E +GMTEN A S I  P    + GTVG      
Sbjct: 311 CKFAAGGAAPMPLALLQWYSQLGLNINEGYGMTENLALSHITEP-GKNQQGTVGPTYAGV 369

Query: 365 QIR-QGEDGELLLKSPGLMTAYYLQPEATAAAFDPDGFFHTGDLCAIDADGCVTITGRVK 423
           Q R   E GE+ ++S  LM  YY +PE +  AF  DG+  TGD   ID  G + ITGRVK
Sbjct: 370 QHRLDPETGEVQMRSQALMQGYYKEPEKSREAFTEDGWLRTGDKGTIDKQGLLRITGRVK 429

Query: 424 DNFKTAKGKYVAPVPIERKLAQDPHVELICVIGSGLPHPVALVQLSEGATLQ------AR 477
           D FKT KGKYVAP PIE KL     VE   V G+ L  P+ +V L+  A  +      AR
Sbjct: 430 DLFKTGKGKYVAPAPIEDKLVMHEAVEACVVTGANLGQPLGIVMLNADAAARVANDAAAR 489

Query: 478 EEVRTSLKATLDSVNPHLESHEHVDAIVVVNEPWTIENDVLTPTLKIKRHVLEKAFSERV 537
            E+ TSL + L  +N  L+ HE +  IVVV+  WT++ND++TPT K+KR+ +E  ++   
Sbjct: 490 TELETSLASHLKGINATLDPHEQLQCIVVVSTAWTVDNDIITPTFKVKRNRIEDLYARYY 549

Query: 538 D--GIRGAQVRWE 548
           +     G +V W+
Sbjct: 550 ETWETSGKRVIWQ 562