Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 487 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas simiae WCS417

 Score =  374 bits (961), Expect = e-108
 Identities = 218/471 (46%), Positives = 283/471 (60%), Gaps = 9/471 (1%)

Query: 12  FPYAGEQTFL-ELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTDKIDE 70
           F +AG    + EL+LDSR +R GD+FLA+PG K DGR  I  AL +GA AV        E
Sbjct: 9   FAHAGRDLLIRELSLDSRNVRAGDLFLAVPGGKFDGRAHIADALQRGAAAVAYEV----E 64

Query: 71  QGKVIATEQGVQIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTSQLCAQLV 130
              V+       I    LA Q+S +A  R+     + + ++G+TGTNGKTS +QL AQ +
Sbjct: 65  GATVLPITDVPLIPVKGLAAQLSDIAG-RFYGDPSRQVNLIGVTGTNGKTSVTQLIAQAL 123

Query: 131 TLLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCAMEVSSHGLVQ 190
            LL     ++GTLG G +G L    +TT + I +   L +    G    AMEVSSHGL Q
Sbjct: 124 DLLGQHCGIVGTLGTGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHGLHQ 183

Query: 191 GRVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVNLDDPVGAAWLS 250
           GRV A+ FDVAV TNL+RDHLDYHG ME YA  K  LF ++ L   +VNLDD  G    +
Sbjct: 184 GRVAALAFDVAVMTNLSRDHLDYHGTMEAYAAEKAKLFAWNDLKCRVVNLDDAFGRQLAA 243

Query: 251 ELANVPAKMWGFSIEAHTEVAFYTKNAQFNDQGVQATLVWPEGEVDIRSPLLGAFNLSNL 310
           E  +  +++  +S+E       Y + AQFND+GV+ATLV P+GE  +RS LLG FNLSN 
Sbjct: 244 E--DRESRLISYSLE-DASAYLYCREAQFNDEGVRATLVTPQGEHHLRSSLLGRFNLSNT 300

Query: 311 LAALSALYLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYAHTPDAIEQALNAL 370
           LAA+ AL      +  +   +P L    GRM+R        +VVDYAHTPDA+E+ L AL
Sbjct: 301 LAAVGALLGLEYALDEILRVLPKLEGPVGRMQRLGGGKQPLVVVDYAHTPDALEKVLVAL 360

Query: 371 RRHCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDPNQIITDIIQGL 430
           R H  G+L C+FGCGGDRD+GKRPLM +  E+ AD ++VT DN RSEDP+QI  DI  G 
Sbjct: 361 RPHAKGKLLCLFGCGGDRDRGKRPLMAEIVERLADGVLVTDDNPRSEDPSQIFDDIRVGF 420

Query: 431 THPERALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRHDYDE 481
               +A     R  AI  ++A A   DV++LAGKGHE YQE  G RH + +
Sbjct: 421 KDVSKATFVAGRGVAIAQLIASAGADDVVVLAGKGHEDYQEINGERHAFSD 471