Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 496 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas putida KT2440

 Score =  396 bits (1018), Expect = e-115
 Identities = 229/491 (46%), Positives = 303/491 (61%), Gaps = 20/491 (4%)

Query: 8   LAPWFPYAGEQTFL-ELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTD 66
           L+  F +A     + ELTLDSR++R GD+FLA+PG KVDGR+ I  ALA+GA AV     
Sbjct: 6   LSKLFAHASRDPLIRELTLDSRSVRPGDLFLAVPGAKVDGREHIADALARGAAAVAY--- 62

Query: 67  KIDEQGKVIATEQGVQIYFYQ-LARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTSQL 125
             +EQG  +     V +   + L  Q+S +A  R+     + + +VG+TGTNGKTS +QL
Sbjct: 63  --EEQGANVLPLTDVPLIPVKGLIAQLSDIAG-RFYGEPSRQLNLVGVTGTNGKTSVTQL 119

Query: 126 CAQLVTLLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCAMEVSS 185
            AQ + LL  +  ++GTLG G +GEL     TT D I +   L++    G    AMEVSS
Sbjct: 120 VAQALDLLGQRCGLIGTLGTGFYGELQSGRLTTPDPIAVQSTLNDLKKGGARAVAMEVSS 179

Query: 186 HGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVNLDDPVG 245
           H L QGRV A+ FD+AV TNL+RDHLDYHG ME Y  AK  LF + SL   +VNLDD  G
Sbjct: 180 HALEQGRVAALEFDIAVMTNLSRDHLDYHGSMEAYEAAKAKLFAWPSLRCQVVNLDDDFG 239

Query: 246 AAWLSELANVPA------KMWGFSIEAHTEVAFYTKNAQFNDQGVQATLVWPEGEVDIRS 299
               ++ A  P+      ++  +S+E+  E + + + A F+D GV+ATLV  +GE  +RS
Sbjct: 240 RRLAADFARRPSVDHIETRLLSYSLES-PEASLFCREAVFSDDGVRATLVTAQGERILRS 298

Query: 300 PLLGAFNLSNLLAALSALYLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYAHT 359
            LLG FNLSN+LAA++ L      +  +    P L    GRM+R    D   +VVDYAHT
Sbjct: 299 QLLGRFNLSNMLAAVATLLALDYALDEILKVTPQLQGPVGRMQRLGGGDKPLVVVDYAHT 358

Query: 360 PDAIEQALNALRRHCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDP 419
           PDA+E+ L ALR H  G+L C+FGCGGDRD+GKRPLM + AE+ ADR++VT DN R+EDP
Sbjct: 359 PDALEKVLEALRPHAHGKLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDP 418

Query: 420 NQIITDIIQGLTHPERALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRHDY 479
           ++I  DI  G T P+       R  AI H++A A   DVI+LAGKGHE YQE  G RHD+
Sbjct: 419 SRIFDDIRPGFTRPDDVEFVAGRGEAIAHLIATAAANDVIVLAGKGHEDYQEINGERHDF 478

Query: 480 D-----ERALA 485
                 E+ALA
Sbjct: 479 SDLTEAEKALA 489