Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 513 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase (EC 6.3.2.13) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  324 bits (830), Expect = 5e-93
 Identities = 206/507 (40%), Positives = 273/507 (53%), Gaps = 44/507 (8%)

Query: 8   LAPWFPYAGEQTFLELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTDK 67
           +A W    G +    L  DSR +  GD F+A PG   DGR+F+  AL  GA A LV  D 
Sbjct: 10  VADWLRERGVRA---LHCDSRRVGAGDAFVAWPGAATDGRRFVAGALQAGAVAALVEQDG 66

Query: 68  IDEQG----KVIATEQGVQIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTS 123
               G    +V+A           L     A+A   +      ++ +V ITGTNGKTST+
Sbjct: 67  AQAYGFDDERVVAVPG--------LKASAGAIAGA-FHGTPSAALDMVAITGTNGKTSTA 117

Query: 124 QLCAQLVTLLEGKAAVMGTLGNG-------LWGELVDSGNTTADAITLMRQLHEFADKGV 176
              AQL++      AV+GTLG G           LV +G TT D + L  +L  F D G+
Sbjct: 118 WWTAQLLSFCAMPCAVVGTLGMGRPPRPGQADSPLVATGLTTPDPVMLQAELRRFVDSGL 177

Query: 177 NTCAMEVSSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHG 236
             CA+E SS G+V+GR++A    VAVFTN T+DHLD+HG ME Y  AK  LF +  L   
Sbjct: 178 KACAVEASSIGIVEGRLNATQLRVAVFTNFTQDHLDFHGSMEAYWTAKAELFDWPGLASA 237

Query: 237 LVNLDDPVGAAWLSELANVPAKMWGFSIEA--HTEVAFYTKNAQFNDQGVQATLVWPEGE 294
           +VN+DD  GA   + LA     +W  +IEA  H     + ++  F   G+   +    GE
Sbjct: 238 VVNIDDARGADLAATLAQRGLDLWTVAIEAGHHGRARLFAQDLSFTHSGMALQV----GE 293

Query: 295 VDIRS----------PLLGAFNLSNLLAALSALYLQGMDMRALASKVPYLVPVAGRMERF 344
            D R           PL+G +N+SNLL  L++    G+ +         L PV GRME+ 
Sbjct: 294 RDARGRTLAQHALSLPLVGRYNVSNLLCVLASARALGVALADAVQACAALTPVPGRMEQA 353

Query: 345 TT--ADNITLVVDYAHTPDAIEQALNALR---RHCAGELWCVFGCGGDRDKGKRPLMGQA 399
               +D   ++VDYAHTPDA+E+AL AL+   R   G LW V GCGGDRD GKRPLM  A
Sbjct: 354 AAGVSDQPLVLVDYAHTPDALEKALQALQPLARQRGGALWVVVGCGGDRDAGKRPLMAAA 413

Query: 400 AEQCADRIMVTSDNARSEDPNQIITDIIQGLTHPERALTEVDRVAAIKHVVAQAKPGDVI 459
           AE+ A R ++TSDN RSEDP  I+  ++ GL  P+ AL E DR  AI   VA+A   DV+
Sbjct: 414 AEREAQRPVLTSDNPRSEDPLAILRQMVAGLASPDAALVEPDRAQAIALAVARADARDVV 473

Query: 460 LLAGKGHETYQEAAGVRHDYDERALAR 486
           L+AGKGHE YQ+  GV+  + +   AR
Sbjct: 474 LIAGKGHEDYQDVKGVKKPFSDLLHAR 500