Pairwise Alignments

Query, 488 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 471 a.a., UDP-N-acetylmuramate-alanine ligase from Agrobacterium fabrum C58

 Score =  385 bits (988), Expect = e-111
 Identities = 212/454 (46%), Positives = 289/454 (63%), Gaps = 13/454 (2%)

Query: 18  RRIKRIHFVGIGGAGMGGIAEVLVNEGYVVSGSDIAQNAVTDRLCLLGAKIHIGHGADNV 77
           + I  +HF+GIGG GM GIAEVL N G+ V GSD A +A   RL   G ++ +GH ADN+
Sbjct: 5   KAIGLVHFIGIGGIGMSGIAEVLHNLGHRVQGSDQADSANVQRLRDKGIEVFVGHTADNL 64

Query: 78  QQADVVVVSTAINPENPEIIAAKELRIPIVRRAEMLAELMRYRHGVAIAGTHGKTTTTSL 137
             A+VVVVSTAI   NPE+IAA+E  +PIVRRAEMLAELMR+R+ +AI GTHGKTTTTS+
Sbjct: 65  GDAEVVVVSTAIKKNNPELIAAREKHLPIVRRAEMLAELMRFRNAIAIGGTHGKTTTTSM 124

Query: 138 IASLYGQAGRDPTFVIGGLLNSAGTNARLGTSRYLIAEADESDASFLHLQPMVSVVTNIE 197
           +A+L      DPT + GG++N+ GTNAR+G   +++ EADESD +FL L   V+V+TNI+
Sbjct: 125 VATLLEAGNLDPTVINGGIINAYGTNARMGEGEWMVVEADESDGTFLKLPADVAVITNID 184

Query: 198 ADHMDTYGGDFEKLKSTFVDFLHNLPFYGVAVVCIDDAVVREIMPRI-GRHMITYGFSDD 256
            +H+D Y G+F+ +++ F  F+ N+PFYG  V+C+D   V+ ++ RI  R +ITYG +  
Sbjct: 185 PEHLDHY-GNFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQALVGRIEDRKVITYGENPQ 243

Query: 257 ADVQALNFHQQGHQCRFTV----RRKGK--EDLDLLLNLPGQHNVLNALAAIAVATEDEI 310
           ADV+  N    G +  F V    RR GK     DL+L +PG+HNV NA AAIAVA    I
Sbjct: 244 ADVRFSNVRIDGTRSIFDVEIRRRRTGKIFSFKDLVLPMPGRHNVSNATAAIAVANRLGI 303

Query: 311 DDSAIIQALAEFQGIGRRFQHLGKFATPKGEVMLVDDYGHHPSEVAATIKAARAGWPDKR 370
            ++ I + LA F G+ RRF   G+       V + DDYGHHP E+ A + AAR      R
Sbjct: 304 SEADIKKGLASFAGVKRRFTLTGE----ANGVQVFDDYGHHPVEIKAVLAAAREACKG-R 358

Query: 371 LVMAYQPHRYTRTRDLYEDFIEVLSQVDCLLLLEVYSAGEAPIPGADGRALCRSIRLRGQ 430
           ++  +QPHRY+R   L++DF    +  D +LL  VY+AGE PI GA   AL  +I+  G 
Sbjct: 359 IIAVHQPHRYSRLSSLFDDFAHCFNDADTILLAPVYAAGEDPIEGASSEALVSAIKAAGH 418

Query: 431 LDPIFIASPDQLAEVLPDVLQEGDLLLTQGAGNI 464
            D  F+   + LA  +  +   GD ++  GAGNI
Sbjct: 419 RDARFLEKREDLASQVAAIANPGDFVVLLGAGNI 452