Pairwise Alignments

Query, 383 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 372 a.a., ABC transporter permease from Variovorax sp. OAS795

 Score = 70.5 bits (171), Expect = 7e-17
 Identities = 80/360 (22%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MNLWQLVLTELKAIVSDKAIAVTLFGGVLFYSVLYPLPYLHQVPTEQQLIVVDLDHSSLS 60
           + +  L   EL AI  D A  V LF   +  S+++     + + +     ++D   +  S
Sbjct: 6   LRIANLCRKELLAIFKDPASRVILFVPAIMQSLIFGYGATYDL-SNVPYALLDQSRTGAS 64

Query: 61  RQLIRHADASAKIQVIGQVGSITEAKRFIETGKAHGLLVIPEGFRRDLLLGKGVTLSYGG 120
            +LI H D++     +  + +  + +  I+T +A  ++ I   F + L        S G 
Sbjct: 65  TELIAHLDSTGVFHRVATLRTQADIREVIDTEEALLVIQIAPNFEQQL--------SAGQ 116

Query: 121 DASYFLIYSAVAEGLVSAGMDAGKQVQLIGMLAQGKNPKEAEQNLNSLHLNSVPAFNPSL 180
            A+  LI  A      +AG  AG  V  +      +    A    N L + S   FNP+L
Sbjct: 117 PAAVQLILDARNSN--TAGSAAG-YVSAVVERYNAELRTRAGAPPNPLTIESRAWFNPNL 173

Query: 181 GYTPYVVPGLFL-LILHQTLLIGTGILGAGQWRSRSYWQQV-----SPLQLVCGRILAFM 234
                ++PGL   L + QTLL+    L   + R +  + Q+     SPL+++ G+ L  +
Sbjct: 174 ETRWNLLPGLIAALSMLQTLLLTA--LSVAREREQGTFDQLLVTPMSPLEIMIGKALPPV 231

Query: 235 LIYMVFTSFYVGYCYHWYKVSIQASLGLVALWLLPFLLATAAAGVAMSTLFSRRDLPTQV 294
           L+ +  ++  +     W+ + +  SL  +   L+ F +A+   G+++S + +        
Sbjct: 232 LVGLAQSTLILLVALFWFGIPMAGSLATLYTGLVFFTVASVGIGLSISAVSANMQQAMLY 291

Query: 295 LLLISMPILFVSGFVWPIALIPEPL---VLGSQIIPAVPAIMGM-LELNQMGASWASVLP 350
             ++ MP++ +SG   P+  +P+ L    + + +  A+  +  + LE   +G  W  ++P
Sbjct: 292 TFVLLMPMMLLSGLTTPVRNMPQVLQSITMANPLRFAIDLVQRVYLEGVGLGTVWHDLVP 351