Pairwise Alignments

Query, 383 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 368 a.a., putative multidrug ABC transporter permease YbhR from Escherichia coli ECRC98

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 26/366 (7%)

Query: 3   LWQLVLTELKAIVSDKAIAVTLFGGVLFYSVLYPLPYLHQVPTEQQLIVVDLDHSSLSRQ 62
           LW L+  EL++++ +      L   VL   +L+P     +V T   + + D D+   S +
Sbjct: 5   LWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEV-TNATIAIYDEDNGEHSVE 63

Query: 63  LI-RHADASAKIQVIGQVGSITEAKRFIETGKAHGLLVIPEGFRRDLLLGKGVTLSYGGD 121
           L  R A ASA   V+  + S  E +  I+T KA  L+  P  F R L   +   L    D
Sbjct: 64  LTQRFARASAFTHVL-LLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLILD 122

Query: 122 ASYFLIYSAVAEGLVSAGMDAGKQVQLIGMLAQGKNPKEAEQNLNSLHLNSVPAFNPSLG 181
                          SA + A    Q++    Q     + + N + L + +   +NP+L 
Sbjct: 123 G----------RNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNW--YNPNLD 170

Query: 182 YTPYVVPGLFLLILHQTLLIGTGILGAGQWRSRSYWQQ--VSPL---QLVCGRILAFMLI 236
           Y  +VVP L  +I    ++I T  L   + R +    Q  VSPL   Q+  G+ +  +++
Sbjct: 171 YKWFVVPSLIAMITTIGVMIVTS-LSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIV 229

Query: 237 YMVFTSFYVGYCYHWYKVSIQASLGLVALWLLPFLLATAAAGVAMSTLFSRRDLPTQVLL 296
                +  +      Y++    SL L    ++ + L+    G+ +S+L S +      + 
Sbjct: 230 ATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVF 289

Query: 297 LISMPILFVSGFVWPIALIPEPLVLGSQIIPAVPAIMGMLEL-NQMGASWASVLPKWLQL 355
           +  MP + +SG+V P+  +P  L    Q +  +  I    ++  Q+    AS+   W  L
Sbjct: 290 VFMMPAILLSGYVSPVENMPVWL----QNLTWINPIRHFTDITKQIYLKDASLDIVWNSL 345

Query: 356 WGLFVL 361
           W L V+
Sbjct: 346 WPLLVI 351