Pairwise Alignments

Query, 455 a.a., major facilitator transporter (RefSeq) from Shewanella sp. ANA-3

Subject, 454 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  354 bits (909), Expect = e-102
 Identities = 189/451 (41%), Positives = 275/451 (60%), Gaps = 5/451 (1%)

Query: 1   MGNNGLSGTEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLT 60
           M +  ++  E++  + L +VF LRM+G+FM++PV   YG  L+G S   +GIAIG YGLT
Sbjct: 1   MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLT 60

Query: 61  QAVLQIPMGILSDKYGRKPVILAGLVLFAIGSLIAANADTIYGVVFGRAVQGMGAIAAAV 120
           QAV QIP G+LSD+ GRKP+I+ GL +FA GS+IAA +D+I+G++ GRA+QG GAIAAAV
Sbjct: 61  QAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAV 120

Query: 121 LALAADLTRDEQRTKVMAIIGMCIGGSFALSLLVGPIVAQHLGLSGLFLLTAGLAVLGML 180
           +AL +DLTR++ RTK MA IG+  G +FA+++++GPI+   LGL  LF + A LA  G+ 
Sbjct: 121 MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIA 180

Query: 181 IVQLLVPNPISHAPKGDTLAAPAKLKRMLTDPQLFRLDAGIFILHLVLTAVFVALPLDLV 240
           +   +VPN  +H    ++        ++L +P+L +L+ GI  LH++L + FVALP  L 
Sbjct: 181 LTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQLA 240

Query: 241 DAGLVKEKHWMLYFPAFVGAFFLMVPLIIIGVKRKNTKAMFQIALVIMMFALAAMAIFSN 300
           DAG    +HW +Y    + AF  +VP II    ++  K +F   + +++ A   +     
Sbjct: 241 DAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQT 300

Query: 301 NLWVLSVAVLLFFTGFNYLEASLPSLIAKFCPVGEKGSAMGVYSTSQFLGAFCGGMLGGG 360
             W L V V LFF  FN +EA LPSLI+K  P G KG+AMGVYSTSQFLG   GG LGG 
Sbjct: 301 QFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGW 360

Query: 361 AFQLVGAVGVFIVALVLMGVWLLLTLGMKNPVLLKSYTLEAAVKDKAQARDMASQLSQLM 420
              +    GVF+   +L  VWL +   MK P  + S  +E      A    +  +L +  
Sbjct: 361 INGMFDGQGVFLAGAMLAAVWLTVASTMKEPPYVSSLRIEIPANIAAN-EALKVRLLETE 419

Query: 421 GVVEAIVVLDEKVAYLKVD----EHFDLREA 447
           G+ E ++  +E  AY+K+D      F++ +A
Sbjct: 420 GIKEVLIAEEEHSAYVKIDSKVTNRFEIEQA 450