Pairwise Alignments

Query, 452 a.a., amino acid carrier protein (RefSeq) from Shewanella sp. ANA-3

Subject, 476 a.a., Uncharacterized transporter YaaJ from Escherichia coli ECOR38

 Score =  279 bits (714), Expect = 1e-79
 Identities = 169/445 (37%), Positives = 247/445 (55%), Gaps = 23/445 (5%)

Query: 8   SSLNGIVWGPVTLCLLVGTGIYLTLRLRLIQVFRLPMALGLLFKPA--KGHGDLSSFAAL 65
           S +N ++WG V + LL G G + T R   +Q FR     G   K +     G L+SF +L
Sbjct: 6   SFINSVLWGSVMIYLLFGAGCWFTFRTGFVQ-FRYIRQFGKSLKNSIHPQPGGLTSFQSL 64

Query: 66  CTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQ 125
           CT+L+A +G+GN+ GVA AI  GGPGA+FWMW+AAF GMAT +AEC LA  Y+  D  GQ
Sbjct: 65  CTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYKERDVNGQ 124

Query: 126 IAGGPMYYIERGLGLHWMAKLFALF---GVGVAFFGIGTFAQVNAISDALTIAFEVPTWA 182
             GGP +Y+ RGLG+ WM  LFALF     G+ F G+    Q NA++ AL+ +F+ P   
Sbjct: 125 FRGGPAWYMARGLGMRWMGVLFALFLLIAYGIIFSGV----QANAVARALSFSFDFPPLV 180

Query: 183 TALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWILVSFAESILPALQLVVES 242
           T ++L +        G+  ++ + Q  VP M+I +VL  + I V     +   +  + ES
Sbjct: 181 TGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLTSLVICVMNIGQLPHVIWSIFES 240

Query: 243 AFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAAAAKT--NEPVEQGLVSM 300
           AF    AAGG  G T++QAI  G  R +FSNE+G+GS P AAAAA +    P  QG+V M
Sbjct: 241 AFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSTPNAAAAAASWPPHPAAQGIVQM 300

Query: 301 TGTFFDTIIICTITGLVLIITGVWSGDT----AGAAMTSAAFS-LGGSAAIGQYLVTIAL 355
            G F DT++ICT + +++++ G  +G T     G  +   A   L GS   G   VT+ +
Sbjct: 301 IGIFIDTLVICTASAMLILLAG--NGTTYMPLEGIQLIQKAMRVLMGS--WGAEFVTLVV 356

Query: 356 VCFAFTTILGWHYYGERCWYY--LVGERGLRAYQMLFLGLIAVGAFIKLDVIWLLADTVN 413
           + FAF++I+  + Y E   ++  L   + +   ++     +  G  + L ++W LAD + 
Sbjct: 357 ILFAFSSIVANYIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSLPLMWQLADIIM 416

Query: 414 GLMAIPNLIAIIGLRHVIIAETQSY 438
             MAI NL AI+ L  V+      Y
Sbjct: 417 ACMAITNLTAILLLSPVVHTIASDY 441