Pairwise Alignments

Query, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

Subject, 1258 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  490 bits (1261), Expect = e-142
 Identities = 267/547 (48%), Positives = 365/547 (66%), Gaps = 9/547 (1%)

Query: 1010 VVSMVDMTELKLLSDELLVAKEEADAASKAKGDFLANMSHEIRTPMNAIIGMSQLCLQTA 1069
            VV+  D+TE K     L  A + A+AAS+AK DFLANMSHEIRTPMNAIIGMS L L+T 
Sbjct: 583  VVTFRDITERKRADALLHQALDRAEAASQAKADFLANMSHEIRTPMNAIIGMSHLALKTE 642

Query: 1070 LDKKQKNYVEKIERASKSLLSIINDILDFSKIEAGKLDIESVPFQLDTMLEDLSDMFSEK 1129
            L+ +Q++YV KI+++ + LL IINDILDFSKIEAGKL +E     LDT+L++++++ SEK
Sbjct: 643  LNPRQRDYVRKIQQSGQHLLGIINDILDFSKIEAGKLSVEKTAVHLDTVLDNVANLISEK 702

Query: 1130 AAHKQLELLFAVAPNVPRHLFGDSLRLGQVLINLMNNAIKFTERGEVLLSLNLVEQQNDD 1189
               K LEL+F VA +VP  + GD LRLGQ+LIN  NNA+KFTE GE+++++ L E   + 
Sbjct: 703  TIAKGLELIFDVASDVPNDMVGDPLRLGQILINYANNAVKFTETGEIVVAVRLAEDLGEA 762

Query: 1190 VVLRFSVRDSGIGLTADQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGTIGV 1249
            V LRF VRD+GIGL+A+Q  +LF+SF QADTSTTRKYGGTGLGLAI ++L ELM G +GV
Sbjct: 763  VRLRFEVRDTGIGLSAEQMGRLFQSFQQADTSTTRKYGGTGLGLAISRKLAELMDGEVGV 822

Query: 1250 ESQFGHGSTFYFTVKLQISSGQKLTVAQ-ELEGMPILVADDNATARDIMRTTLESMGFRV 1308
            ESQ G GSTF+FT  L     ++  V + +L G  +LV DDN  AR ++   L SM FRV
Sbjct: 823  ESQPGRGSTFWFTACLGKGRPRRALVPKPDLRGRHMLVVDDNENARAVLVDMLTSMSFRV 882

Query: 1309 DTVRSGEEAVTRCIQ----QEYAVALIDWKMPNLDGIETAKQIKQQA-KKAPRILMVSAH 1363
            + V SG  AV R  +    + + V  +DW+MP +DGIETA+ I        P ++MV+AH
Sbjct: 883  EAVESGAAAVARVREVAGAKPFEVVFLDWQMPGMDGIETARAILGLGLTSPPHMIMVTAH 942

Query: 1364 ANQDFLSQIEELGLAGYISKPISASRLLDGIINSLGRA--GVLPVRRQSESIDPKLLLPL 1421
              ++ +   E  G+   + KP++ S + D ++ +LG A  G          +    L  L
Sbjct: 943  GREEVMKAAESAGIEDVLIKPVNPSIMFDAVMRALGAALEGDPEEAAAGREVSDDALASL 1002

Query: 1422 KGKRILLVEDNEMNLEVATEFLEQVGIILSIATNGQIALDKLEQQSFDLVLMDCQMPVMD 1481
            +G R+LL EDN+ N +VATE L   G+ + +A NG+IA+D +    +D+VLMD QMPVMD
Sbjct: 1003 RGLRVLLAEDNDFNQQVATELLADGGVEVEVAENGKIAVDMVMAAPYDMVLMDMQMPVMD 1062

Query: 1482 GYQATQALRKRPELTELPVVAMTANAMAGDKEMCLRAGMNDHIAKPIEVNLLYQTLLKYL 1541
            G  AT+ +R R    +LPV+AMTANAM  D++ C  AGMND++ KPI+ + L+  LLK+ 
Sbjct: 1063 GVAATREIR-RLGFGDLPVIAMTANAMQADRDRCAAAGMNDYLTKPIDPDELFACLLKWR 1121

Query: 1542 GGSASLV 1548
            G + + V
Sbjct: 1122 GVAPTAV 1128